1 5' 3' | 2 5' 3' | 3 5' 3' |
TGATGAAGGTGACGAAATTTGTGGAGCAGTTGTCAGCGTGAGACGAGCGCAGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtcatgatctgacttgaaatactcaagtgatgttcaacaggataattgcgggggttttatgggcattcgctttgttaaaggcgcctctacagg...
species | Physcomitrella patens |
transcript | PP1S39_197V6.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAG GTCAGCATCGCGAAGCANTGGAAAGATGTTCTGGATTACAEST: gi|67571986|gb|BJ944810.1|BJ944810
genomic: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtc ... gggattgcagGTCAGCATCGCGAAGCAATGGAAAGATGTTCTGGATTACA
EST: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAG GTCAGCATCGCGAAEST: gi|208374804|gb|DC932059.1|DC932059
genomic: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtc ... gggattgcagGTCAGCATCGCGAA
EST: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAG GTCAGCATCGCGAAGCAATGGAAAGATGTTCTGGATTACAATGACAAGAEST: gi|208370617|gb|DC936133.1|DC936133
genomic: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtc ... gggattgcagGTCAGCATCGCGAAGCAATGGAAAGATGTTCTGGATTACAATGACAAGA
EST: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAG GTCAGCATCGCGAAEST: gi|67507600|gb|BJ940481.1|BJ940481
genomic: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtc ... gggattgcagGTCAGCATCGCGAA
EST: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAG GTCAGCATCGCGAAGCAATGGAAAGATGTTCTGGATTACAATGACAAGATTEST: gi|162225236|gb|FC402002.1|FC402002
genomic: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtc ... gggattgcagGTCAGCATCGCGAAGCAATGGAAAGATGTTCTGGATTACAATGACAAGATT
EST: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAG GTCAGCATCGCGAAGCAATGGAAAGATGTTCTGGATTACAATGACAAGATTEST: gi|208374770|gb|DC932039.1|DC932039
genomic: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtc ... gggattgcagGTCAGCATCGCGAAGCAATGGAAAGATGTTCTGGATTACAATGACAAGATT
EST: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAG GTCAGCATCGCGAAGCANTGGAAAGATGTTCTGGATTACANTGACAANATT
genomic: AGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtc ... gggattgcagGTCAGCATCGCGAAGCAATGGAAAGATGTTCTGGATTACAATGACAAGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATGAAGGTGACGAAATTTGTGGAGCAGTTGTCAGCGTGAGACGAGCGCAGGACAAAATAGCTATCTGGACTAAGACTGCCTCTAATGAGGCTGCTCAGgtgagttgtcatgatctgacttgaaatactcaagtgatgttcaacaggataattgcgggggttttatgggcattcgctttgttaaaggcgcctctacagg
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