1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtaatgtgcatcatctattttcattgaatatgaacttgtcattgaatctattctggtgtttccggggatggcgttggcaacgtagtgtgctgatgatgtgtgaacatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTCTGAAGACCAGGAAGTATGCCGAGGTTGTGCCAGCGTTGACGAACATGG
species | Physcomitrella patens |
transcript | PP1S399_19V6.2 |
intron # | 7 |
splice site | 3' |
intron type | U2 |
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162199027|gb|FC372378.1|FC372378
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162169125|gb|FC346015.1|FC346015
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|18334113|gb|BJ166129.1|BJ166129
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37824108|gb|BJ582174.1|BJ582174
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37829031|gb|BJ587043.1|BJ587043
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162168331|gb|FC344645.1|FC344645
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: GGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162185337|gb|FC360911.1|FC360911
genomic: GGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|7582967|gb|AW699131.1|AW699131
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|208350801|gb|DC925932.1|DC925932
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGNGGATCAACCCTGACTGCGGTEST: gi|162242610|gb|FC419239.1|FC419239
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37844121|gb|BJ602129.1|BJ602129
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162199028|gb|FC372379.1|FC372379
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162185453|gb|FC362548.1|FC362548
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37852242|gb|BJ610250.1|BJ610250
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|18333927|gb|BJ165943.1|BJ165943
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|19788718|gb|BQ040874.1|BQ040874
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|22492730|gb|BU052653.1|BU052653
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCCGGTGTTGGEST: gi|162240578|gb|FC419355.1|FC419355
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGC-GGTGTTGG
EST: GGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162202035|gb|FC377241.1|FC377241
genomic: GGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162164319|gb|FC340990.1|FC340990
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162169967|gb|FC345907.1|FC345907
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37820974|gb|BJ579040.1|BJ579040
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162173837|gb|FC349429.1|FC349429
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162171093|gb|FC347707.1|FC347707
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162189798|gb|FC365540.1|FC365540
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|18336645|gb|BJ168668.1|BJ168668
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162266876|gb|FC441755.1|FC441755
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37826426|gb|BJ584438.1|BJ584438
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|7584055|gb|AW699954.1|AW699954
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37824956|gb|BJ583022.1|BJ583022
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162153730|gb|FC329133.1|FC329133
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162235721|gb|FC411024.1|FC411024
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162277616|gb|FC453247.1|FC453247
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37848165|gb|BJ606173.1|BJ606173
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|18341070|gb|BJ173103.1|BJ173103
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37827211|gb|BJ585223.1|BJ585223
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162275653|gb|FC451655.1|FC451655
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162160497|gb|FC336887.1|FC336887
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162152924|gb|FC329226.1|FC329226
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162187121|gb|FC362903.1|FC362903
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162231361|gb|FC406784.1|FC406784
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|16137552|gb|BI894416.1|BI894416
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCNGTEST: gi|22132800|gb|BQ827369.1|BQ827369
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: CGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162243204|gb|FC415556.1|FC415556
genomic: CGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162235722|gb|FC411025.1|FC411025
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162253311|gb|FC429737.1|FC429737
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37852900|gb|BJ610908.1|BJ610908
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162170068|gb|FC345121.1|FC345121
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37824626|gb|BJ582692.1|BJ582692
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162170067|gb|FC345120.1|FC345120
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162189828|gb|FC365557.1|FC365557
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCCCAAA ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|6167646|gb|AW145910.1|AW145910
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTGGGAGTCCAAGGTATTGEST: gi|37824179|gb|BJ582245.1|BJ582245
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTG
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162152923|gb|FC329225.1|FC329225
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162171047|gb|FC346946.1|FC346946
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162155002|gb|FC331420.1|FC331420
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162181009|gb|FC358663.1|FC358663
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162168195|gb|FC344925.1|FC344925
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|67720741|gb|BJ971000.1|BJ971000
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162185452|gb|FC362547.1|FC362547
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37826435|gb|BJ584447.1|BJ584447
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37844062|gb|BJ602070.1|BJ602070
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162172779|gb|FC348368.1|FC348368
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162168330|gb|FC344644.1|FC344644
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: GGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|208350682|gb|DC918142.1|DC918142
genomic: GGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37839199|gb|BJ597207.1|BJ597207
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162168194|gb|FC344924.1|FC344924
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|67727093|gb|BJ977352.1|BJ977352
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|7583149|gb|AW699313.1|AW699313
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162173838|gb|FC349430.1|FC349430
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|16137655|gb|BI894519.1|BI894519
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37852247|gb|BJ610255.1|BJ610255
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162167715|gb|FC344029.1|FC344029
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162195641|gb|FC370304.1|FC370304
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|67697316|gb|BJ957549.1|BJ957549
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|18338211|gb|BJ170235.1|BJ170235
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37851265|gb|BJ609273.1|BJ609273
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162167716|gb|FC344030.1|FC344030
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37831020|gb|BJ589032.1|BJ589032
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162151973|gb|FC328403.1|FC328403
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|162189842|gb|FC365558.1|FC365558
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTEST: gi|37834857|gb|BJ592869.1|BJ592869
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
EST: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAG ATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
genomic: ACTCCCCTCGCATTCCACCAACAGAGGAGATGGCTGACCGTGCTCGCAAGgtaatgtgca ... acatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGT
tttccggggatggcgttggcaacgtagtgtgctgatgatgtgtgaacatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTCTGAAGACCAGGAAGTATGCCGAGGTTGTGCCAGCGTTGACGAACATGG
tgctgat putative branch site (score: 3)
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaatgtgcatcatctattttcattgaatatgaacttgtcattgaatctattctggtgtttccggggatggcgttggcaacgtagtgtgctgatgatgtgtgaacatgtgcagATGTTGGCGGTGTTGGAGTCCAAGGTATTGTGGATCAACCCTGACTGCGGTCTGAAGACCAGGAAGTATGCCGAGGTTGTGCCAGCGTTGACGAACATGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA