1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...ggtttgttttgtagacacttgacgttacatgctttcctgcctcttacagtagtgttctttaactgggaggcagtcactgaatgaacatcttggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAACTCTC
species | Physcomitrella patens |
transcript | PP1S397_39V6.2 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAG GAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAACEST: gi|7583218|gb|AW699382.1|AW699382
genomic: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAGgtgagtttct ... tggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAAC
EST: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAG GAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAACEST: gi|7583970|gb|AW699870.1|AW699870
genomic: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAGgtgagtttct ... tggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAAC
EST: AAGAAAAGCTCCTTGGAAACACACGATGGAAG GAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAACEST: gi|15327404|gb|BI488043.1|BI488043
genomic: AAGAAAAGCTCCTTGGAAACACACGATGGAAGgtgagtttct ... tggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAAC
EST: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAG GAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAACEST: gi|162267552|gb|FC444303.1|FC444303
genomic: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAGgtgagtttct ... tggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAAC
EST: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAG GAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAACEST: gi|162267551|gb|FC444302.1|FC444302
genomic: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAGgtgagtttct ... tggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAAC
EST: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAG GAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAACEST: gi|18336855|gb|BJ168878.1|BJ168878
genomic: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAGgtgagtttct ... tggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAAC
EST: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAG GAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAAC
genomic: GGAAGAAAAGCTCCTTGGAAACACACGATGGAAGgtgagtttct ... tggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAAC
acagtagtgttctttaactgggaggcagtcactgaatgaacatcttggaatgcagGAGATGATGATTTGCCAGCACATATCAAGTCATCCACGTTTGGTTGCCAACTCTC
ctttaac putative branch site (score: 3)
ttctttaa TA-rich tract