1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...gtatgaatctgtagtagttgctatcttctcttcgcattaattcttgtttatgaaatctgaagctaattattgctcggtttggtttgcttttactgtccagGTCATCATCCAGAAATTGGGTGCATCTGAAACGACCAAGTATGGCATCGTGCAGTACGCCGATCAAATGATGGGTTTGTTCCTTCGTGTTTTCGCTTGCC
species | Physcomitrella patens |
transcript | PP1S207_106V6.2 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: ACCGGGAGAAGCAGAGCGAACTGCAGGCTCTTCTGTGTGGTGTTCTGCAG GTCATCATCCAGAAATTGGGTGCATCTGAAACGACCAAGTATGGCATCGTGEST: gi|162169052|gb|FC345942.1|FC345942
genomic: ACCGGGAGAAGCAGAGCGAACTGCAGGCTCTTCTGTGTGGTGTTCTGCAGgtgagtgatg ... tactgtccagGTCATCATCCAGAAATTGGGTGCATCTGAAACGACCAAGTATGGCATCGTG
EST: ACCGGGAGAAGCAGAGCGAACTGCAGGCTCTTCTGTGTGGTGTTCTGCAG GTCATCATCCAGAAATTGGGTGCATCTGAAACGACCAAGTATGGCATCGTG
genomic: ACCGGGAGAAGCAGAGCGAACTGCAGGCTCTTCTGTGTGGTGTTCTGCAGgtgagtgatg ... tactgtccagGTCATCATCCAGAAATTGGGTGCATCTGAAACGACCAAGTATGGCATCGTG
gtttatgaaatctgaagctaattattgctcggtttggtttgcttttactgtccagGTCATCATCCAGAAATTGGGTGCATCTGAAACGACCAAGTATGGCATCGTGCAGTACGCCGATCAAATGATGGGTTTGTTCCTTCGTGTTTTCGCTTGCC
agctaat putative branch site (score: 3)
tttgctttt putative PPT
taattatt TA-rich tract