1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...cgcagcaaccaactatatatataaataaataaataatatatctgaagatagccaaagtttagctttcttatagttaattaattggcaattgttcattcagCTTGATCTGATCTGTGCGACCAAGGGAACATTGGATTGGATTCAGAAACTCAA
species | Oryza sativa |
transcript | LOC_Os08g44640.2 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: TCGACGAGCTTCTCAACCTTGGCCTCAACGTCACAATCTATAGCGGACAG CTTGATCTGATCTGTGCGACCAAGGGAACATTGGATTGGATTCAGAAACTCEST: gi|14571374|gb|BI118742.1|BI118742
genomic: TCGACGAGCTTCTCAACCTTGGCCTCAACGTCACAATCTATAGCGGACAGgtatcaaact ... gttcattcagCTTGATCTGATCTGTGCGACCAAGGGAACATTGGATTGGATTCAGAAACTC
EST: TCGACGAGCTTCTCAACCTCGGCCTCAACGTCACAATCTATAGCGGACAG CTTGATCTGATCTGTGCGACCAAGGGAACATTGGATTGGATTCAGAAACTCEST: gi|29673997|gb|CB670272.1|CB670272
genomic: TCGACGAGCTTCTCAACCTTGGCCTCAACGTCACAATCTATAGCGGACAGgtatcaaact ... gttcattcagCTTGATCTGATCTGTGCGACCAAGGGAACATTGGATTGGATTCAGAAACTC
EST: TCGACGAGCTTCTCAACCTTGGCCTCAACGTCACAATCTATAGCGGACAG CTTGATCTGATCTGTGCGACCAAGGGAACATTGGATTGGATTCAGAAACTC
genomic: TCGACGAGCTTCTCAACCTTGGCCTCAACGTCACAATCTATAGCGGACAGgtatcaaact ... gttcattcagCTTGATCTGATCTGTGCGACCAAGGGAACATTGGATTGGATTCAGAAACTC
agatagccaaagtttagctttcttatagttaattaattggcaattgttcattcagCTTGATCTGATCTGTGCGACCAAGGGAACATTGGATTGGATTCAGAAACTCAA
aattaat putative branch site (score: 3)
ttcattc putative PPT
tttcttatagttaatt TA-rich tract