1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gcaagtttttatcgagtagatagttctttatgtatcgtcttattttacttgcacttaataacaagtttttcttctattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
species | Oryza sativa |
transcript | LOC_Os02g57670.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAG CGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAGEST: gi|66923353|gb|CX110201.1|CX110201
genomic: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGgcaagttttt ... tattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
EST: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAG CGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAGEST: gi|13420743|gb|AU174833.1|AU174833
genomic: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGgcaagttttt ... tattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
EST: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAG CGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAGEST: gi|27577472|gb|CB000167.1|CB000167
genomic: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGgcaagttttt ... tattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
EST: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAG CGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAGEST: gi|86900092|gb|CI300155.1|CI300155
genomic: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGgcaagttttt ... tattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
EST: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAG CGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAGEST: gi|88976267|gb|CI024484.1|CI024484
genomic: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGgcaagttttt ... tattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
EST: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAG CGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAGEST: gi|44678371|gb|CR291805.1|CR291805
genomic: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGgcaagttttt ... tattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
EST: GCATTCAAAGTGCCTCGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAG CGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
genomic: GCATTCAAAGTGCCACGTAAAGGTGGGAAAGGAAAACAGATATTTGGGAGgcaagttttt ... tattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
atgtatcgtcttattttacttgcacttaataacaagtttttcttctattctacagCGTCACAGCACAAGATCTTGTTGACATCATAAAGTCACAACTTAATAG
taataac putative branch site (score: 34)
tttttcttctattcta putative PPT
ttaataacaagttttt TA-rich tract