1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
...tatggagaaagaatgccaatgtcatttttattagccaaaatttcaagctattgattacggttctatccaccatgattaatggcgaattgactaattgcagAGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAGGGGAATCAGATTACATCCAGGGACAAATCTATCTGAG
species | Oryza sativa |
transcript | LOC_Os02g56850.3 |
intron # | 8 |
splice site | 3' |
intron type | U2 |
EST: GTTTTATCGAAAAGAGCTTCCTCTAAG AGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAGEST: gi|27578226|gb|CB000921.1|CB000921
genomic: GTTTTATCGAAAAGAGCTTCCTCTAAGgtatttatta ... ctaattgcagAGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAG
EST: AAGAGCTTCCTCTAAG AGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAGEST: gi|58601900|gb|CK012428.1|CK012428
genomic: AAGAGCTTCCTCTAAGgtatttatta ... ctaattgcagAGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAG
EST: GGGATGGGTGCGCACGTAGACTTGTTTTATCGAAAAGAGCTTCCTCTAAG AGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAGEST: gi|319908658|gb|HS977786.1|HS977786
genomic: GGGATGGGTGCGCACGTAGACTTGTTTTATCGAAAAGAGCTTCCTCTAAGgtatttatta ... ctaattgcagAGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAG
EST: GGGATGGGTGCGCACGTAGACTTGTTTTATCGAAAAGAGCTTCCTCTAAG AGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAGEST: gi|4714976|gb|AU056093.1|AU056093
genomic: GGGATGGGTGCGCACGTAGACTTGTTTTATCGAAAAGAGCTTCCTCTAAGgtatttatta ... ctaattgcagAGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAG
EST: GGGATGGGTGCGCACGTAGACTTGTTTTATCGAAAAGAGCTTCCTCTAAG AGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAG
genomic: GGGATGGGTGCGCACGTAGACTTGTTTTATCGAAAAGAGCTTCCTCTAAGgtatttatta ... ctaattgcagAGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAG
agctattgattacggttctatccaccatgattaatggcgaattgactaattgcagAGGTTTCGATGATGAGATGAGGACGGTTGTTGCAAGTAACCTTGAGGGAAGGGGAATCAGATTACATCCAGGGACAAATCTATCTGAG
gactaat putative branch site (score: 2)
atgattaat TA-rich tract