1 5' 3' | 2 5' 3' | 3 5' 3' |
gtaatgggacatgaaagattgttgttgttttttgtttcgctgtggttctagaacggatcttttctgcaacttttgtgataattagatcgtgaattttaggggaattttggatttggttgcatgtttggattgttttgatatcgaaggatttgttgatgatgtttgtttggaatttgtttttgacagTTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCCGGATGCGGCGGCAATGGCGGCGACGTGATCGAGCTCCCGGGGTTCCCGG
species | Oryza sativa |
transcript | LOC_Os02g38120.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CCACTGACCTGCAAATCTTGGTGGGTGACTGCTTGTATCAGCTTCACAAG TTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCCEST: gi|88448666|gb|CI694058.1|CI694058
genomic: CCACTGACCTGCAAATCTTGGTGGGTGACTGCTTGTATCAGCTTCACAAGgtaatgggac ... tttttgacagTTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCC
EST: CCACTGACCTGCAAATCTTGGTGGGTGACTGCTTGTATCAGCTTCACAAG TTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCCEST: gi|88740691|gb|CI764199.1|CI764199
genomic: CCACTGACCTGCAAATCTTGGTGGGTGACTGCTTGTATCAGCTTCACAAGgtaatgggac ... tttttgacagTTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCC
EST: CCACTGACCTGCAAATCTTGGTGGGTGACTGCTTGTATCAGCTTCACAAG TTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCCEST: gi|58681201|gb|CK069888.1|CK069888
genomic: CCACTGACCTGCAAATCTTGGTGGGTGACTGCTTGTATCAGCTTCACAAGgtaatgggac ... tttttgacagTTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCC
EST: CCACTGACCTGCAAATCTTGGTGGGTGACTGCTTGTATCAGCTTCACAAG TTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCC
genomic: CCACTGACCTGCAAATCTTGGTGGGTGACTGCTTGTATCAGCTTCACAAGgtaatgggac ... tttttgacagTTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCC
gttttgatatcgaaggatttgttgatgatgtttgtttggaatttgtttttgacagTTTCCTCTGCTGTCGAAATGCCTGCTTCTGCAAGCGCTGTGCGCCGAGTCCGGATGCGGCGGCAATGGCGGCGACGTGATCGAGCTCCCGGGGTTCCCGG
tgttgat putative branch site (score: 4)
tttgttttt putative PPT
aatttgttttt TA-rich tract