1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TTTTCTGTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacattttcatcagattcattcatatattggcattctctgcccatgcaatcaacaaattcccctatttctgtgcttacgtaatataaataacatgt...
species | Oryza sativa |
transcript | LOC_Os01g59990.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: CCTGGACAGCTATGTACAGGAAGCAGCACAAGAA- GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCATCCAAGAA-CCEST: gi|30228671|gb|CB966561.1|CB966561
genomic: CCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCA-CCAAGAAGCC
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|38476375|gb|CF960508.1|CF960508
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|38480261|gb|CF964350.1|CF964350
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88321645|gb|CI672786.1|CI672786
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88237518|gb|CI237367.1|CI237367
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: TACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|58604519|gb|CK015047.1|CK015047
genomic: TACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88207955|gb|CI207804.1|CI207804
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: CAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88240764|gb|CI239926.1|CI239926
genomic: CAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: GTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88351281|gb|CI623503.1|CI623503
genomic: GTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGAAAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|58591772|gb|CF990080.1|CF990080
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88576762|gb|CI673287.1|CI673287
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|163922730|gb|EG712201.1|EG712201
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|163929077|gb|EG713022.1|EG713022
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|55434318|gb|CV730280.1|CV730280
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCGCCAAGAAGCCAEST: gi|88579651|gb|CI688661.1|CI688661
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88336434|gb|CI649021.1|CI649021
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|14981286|gb|BI305964.1|BI305964
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88351707|gb|CI617432.1|CI617432
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88402814|gb|CI613262.1|CI613262
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88724029|gb|CI749288.1|CI749288
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88330914|gb|CI638322.1|CI638322
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|218481886|gb|FG948632.1|FG948632
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|86908394|gb|CI300774.1|CI300774
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88210649|gb|CI210498.1|CI210498
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88237430|gb|CI237279.1|CI237279
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|87018104|gb|CI275918.1|CI275918
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|89193914|gb|CI018232.1|CI018232
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88350195|gb|CI623133.1|CI623133
genomic: AGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|55439109|gb|CV732856.1|CV732856
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|87029957|gb|CI267970.1|CI267970
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: CTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|55434794|gb|CV730521.1|CV730521
genomic: CTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88209988|gb|CI209837.1|CI209837
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: CCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88350259|gb|CI623197.1|CI623197
genomic: CCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|55433285|gb|CV729700.1|CV729700
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|117244000|gb|CT848387.1|CT848387
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|86594449|gb|CI253348.1|CI253348
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|55431287|gb|CV728657.1|CV728657
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88328544|gb|CI676754.1|CI676754
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|163928530|gb|EG711415.1|EG711415
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGEST: gi|163928807|gb|EG711919.1|EG711919
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTG
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88327884|gb|CI648283.1|CI648283
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|58602306|gb|CK012834.1|CK012834
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|86854019|gb|CI252010.1|CI252010
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|33806682|gb|CF329222.1|CF329222
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88743518|gb|CI767026.1|CI767026
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88404907|gb|CI685341.1|CI685341
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|58681869|gb|CK070556.1|CK070556
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|58593374|gb|CF991682.1|CF991682
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCAGCAAGAAGCCAEST: gi|88577347|gb|CI673923.1|CI673923
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|33654059|gb|CF276673.1|CF276673
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88571646|gb|CI663019.1|CI663019
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88327281|gb|CI645058.1|CI645058
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|33690835|gb|CF319074.1|CF319074
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|33690719|gb|CF318958.1|CF318958
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88238659|gb|CI238508.1|CI238508
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|55440029|gb|CV733325.1|CV733325
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|88688905|gb|CI732481.1|CI732481
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCAEST: gi|157650326|gb|EX449960.1|EX449960
genomic: AGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
EST: GTACAGGAAGCAGCACAAGAAG GACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
genomic: GTACAGGAAGCAGCACAAGAAGgtgcaacatt ... tgcactgtagGACATTCATGCTGAAGCTGTCAAGAAGAGGCGTCGCACCACCAAGAAGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTCTGTTTGCCAACTCGAAATGCAAGCGCTACTTCCACAACCGCCTGAAGCCTGCCAAGCTTACCTGGACAGCTATGTACAGGAAGCAGCACAAGAAGgtgcaacattttcatcagattcattcatatattggcattctctgcccatgcaatcaacaaattcccctatttctgtgcttacgtaatataaataacatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctctgccc