1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtatgcttcatgaaaaagatcatgcaccttttctttatacttattttacttcaatctatctgacctgttatgtaccttcttcatcaaagGTTTCTTGATACTGTTGGAATGAAAAGATCGAAAGCCTATCTTGTCAATGGTGTTACAATGTTTGTTGCATGGCTG
species | Oryza sativa |
transcript | LOC_Os01g56230.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TACATGGTTCTCATCTCTGAAACAACCACACCTGGGATCAACCTCCGATG GTTTCTTGATACTGTEST: gi|300215972|gb|HO088598.1|HO088598
genomic: TACATGGTTCTCATCTCTGAAACAACCACACCTGGAATCAACCTCCGATGgtatgcttca ... ttcatcaaagGTTTCTTGATACTGT
EST: TACATGGTTCTCATCTCTGAAACAACCACACCTGGAATCAACCTCCGATG GTTTCTTGATACTGTTGGAATGAAAAGATCGAAAGCCTATCTTGTCAATGG
genomic: TACATGGTTCTCATCTCTGAAACAACCACACCTGGAATCAACCTCCGATGgtatgcttca ... ttcatcaaagGTTTCTTGATACTGTTGGAATGAAAAGATCGAAAGCCTATCTTGTCAATGG
ttatacttattttacttcaatctatctgacctgttatgtaccttcttcatcaaagGTTTCTTGATACTGTTGGAATGAAAAGATCGAAAGCCTATCTTGTCAATGGTGTTACAATGTTTGTTGCATGGCTG
atctgac putative branch site (score: 3)
ccttcttcatc putative PPT
ttattttacttcaat TA-rich tract