1 5' 3' | 2 5' 3' | 3 5' 3' |
gtgtttttctttttaatttcctccaagggtcccaatcaatctcaaccttctcttgcacttctttttatattgttgtttctttgcaaacgagccattgagtatcatgtgctctaatgtgctcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTCAGAACCGTCATCCGGGAGCGTTGTGAAGTATGTCCAGAGTTCG
species | Oryza sativa |
transcript | LOC_Os01g55570.2 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|55409935|gb|CV722311.1|CV722311
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: GGGAATCTCCCCATGCTGTCTTG-TTTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|88573876|gb|CI665645.1|CI665645
genomic: GGGAATCTCCCCATGCTG-CCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|86903736|gb|CI300590.1|CI300590
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|88346141|gb|CI634014.1|CI634014
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|88342540|gb|CI637116.1|CI637116
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|88574306|gb|CI666075.1|CI666075
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTEST: gi|88368616|gb|CI648094.1|CI648094
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGC-AATGTCGTCGCTGCAAAGGCTGCGCAGGACAGT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|14714366|gb|AU198287.1|AU198287
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|88296188|gb|CI667578.1|CI667578
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|88348094|gb|CI637555.1|CI637555
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTEST: gi|33672558|gb|CF300797.1|CF300797
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
EST: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAG GGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
genomic: CGGGAATCTCCCCATGCTGCCTGCAGTGCCAAGCACCAGATTTGTTTCAGgtgtttttct ... tcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTT
gtttctttgcaaacgagccattgagtatcatgtgctctaatgtgctcgtatgcagGGAGGATGAGGAGTCGCAATGTCGTCGCTGCAAAGGCTGCGCAGGACAGTTCAGAACCGTCATCCGGGAGCGTTGTGAAGTATGTCCAGAGTTCG
ctctaat putative branch site (score: 3)