1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtattttgcaagacactcgtatttctggtgtactcctttttacacgctaatggataatttactttgcttaccttgcagCTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTCAGCACATACTGTTCTAAATGTCAAGTTTCAAAGTCACAGGAGTAG
species | Oryza sativa |
transcript | LOC_Os01g43170.3 |
intron # | 6 |
splice site | 3' |
intron type | U2 |
EST: TGCATTCCTAG CTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTGTTCEST: gi|58655600|gb|CK044280.1|CK044280
genomic: TGCATTCCTAGgtattttgca ... taccttgcagCTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTC
EST: AAACTGCATCATCTGCCAGGAGCTGCTCTGGATGGTAGATGCATTCCTAG CTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTC
genomic: AAACTGCATCATCTGCCAA-AGCTGCTCTGGATGGTAGATGCATTCCTAGgtattttgca ... taccttgcagCTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTC
tctggtgtactcctttttacacgctaatggataatttactttgcttaccttgcagCTATTTGCTTCCAGAACTTGATGTGCCTTGCACTTTGAGAATAAATTATTCAGCACATACTGTTCTAAATGTCAAGTTTCAAAGTCACAGGAGTAG
tgcttac putative branch site (score: 14)
ctttgctt CT-rich tract
taatggataattta TA-rich tract