1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gtaaggaaaataagaattacagtggggtttattcttttaattttgttcagttcatgtttgtatgcaggaatatatttatttaccaggactgtgttagtaacttgtagtccattttttcgcatctgaatggattagcagGCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAACACAT
species | Oryza sativa |
transcript | LOC_Os01g43170.3 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: CGATGGAAGGTGTTCTGCCAGATGCTGTGAGCATCGATGTTCTACACCTG GCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAACEST: gi|58655600|gb|CK044280.1|CK044280
genomic: CGATGGAAGGTGTTCTGCCAGATGCTGTGAGCATCGATGTTCTACACCTGgtaaggaaaa ... ggattagcagGCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAAC
EST: GGAAGGTGTTCTGCCAGATGCTGTGAGCATCGATGTTCTACACCTG GCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAACEST: gi|29681003|gb|CB677278.1|CB677278
genomic: GGAAGGTGTTCTGCCAGATGCTGTGAGCATCGATGTTCTACACCTGgtaaggaaaa ... ggattagcagGCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAAC
EST: CGATGGAAGGTGTTCTGCCACATGCTGTGAGCATCGATGTTCTACACCTG GCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAAC
genomic: CGATGGAAGGTGTTCTGCCAGATGCTGTGAGCATCGATGTTCTACACCTGgtaaggaaaa ... ggattagcagGCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAAC
caggactgtgttagtaacttgtagtccattttttcgcatctgaatggattagcagGCCATTGTCACGGAGTTTCATGGCATCCTGGCAGGCTACTGCATCCGGAACACAT
tagtaac putative branch site (score: 8)
atttttt TA-rich tract