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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcctagggcctttgtctgttgtaattaatatattcaattggttactggtcagtccacactccacagtcatgcttcactgacttactggctcca...

Basic information

species Oryza sativa
transcript LOC_Os01g38620.3
intron # 8
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g38620.2 (Oryza sativa), 5'ss of exon 8
lower sequence: GRMZM2G142984_T01 (Zea mays), 5'ss of exon 9
TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcctagggcctttgtctgttgtaattaatatattca-attggttactggt--cagtccacactccacagtc-atgcttcactgacttactggctcca
 |||||||| |||||||||||||| ||||| ||||||||||||||| |||||| |  |||||  | |||   || |||| |||||| | ||| || | ||    | |    ||  |  ||  || |  |  ||  | | |  |    
GGTTGAAATACATATTGGTGGTGCTAAGGGGCCTCCAGACAGGgtatgtttcccacagcctt-atttgtcagaaataatctattcatactggatagtcgtgctgggctttgctaaattgttgatccagccttgtttgaataacg---

upper sequence: LOC_Os01g38620.2 (Oryza sativa), 5'ss of exon 8
lower sequence: GRMZM2G081924_T01 (Zea mays), 5'ss of exon 9
TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcctagggcctttgtctgttgtaattaatatattcaattggttactggtcagtccacactccacagtcatgcttcactgactta--ctggctcca------
|||||||||||||||||||||||| ||||| ||||||||||||||| |||||  |  ||||| || |||   || |||| ||||||      |||||| ||||| |  ||  ||  |  |   |   |||   |  || | |  |      
TGTTGAAATCCATATTGGTGGTGCTAAGGGGCCTCCAGACAGGgtatgtttcgcacagcctt-gtttgtcagaaataatctattca------tactggacagtc-atgctggactttgctaaattgttgatccagccttgtttgaataatg
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88565766|gb|CI496483.1|CI496483
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88565207|gb|CI495924.1|CI495924
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88665783|gb|CI715939.1|CI715939
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|1632517|gb|C20246.1|C20246
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATNCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88847382|gb|CI011325.1|CI011325
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88202283|gb|CI202638.1|CI202638
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|5455349|gb|AU075592.1|AU075592
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|38475427|gb|CF959560.1|CF959560
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|218496740|gb|FG958327.1|FG958327
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88676820|gb|CI730933.1|CI730933
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86842694|gb|CI341824.1|CI341824
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88454736|gb|CI511708.1|CI511708
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88199815|gb|CI199665.1|CI199665
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86600577|gb|CI356334.1|CI356334
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|89185534|gb|CI052060.1|CI052060
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|4968690|gb|AU065594.1|AU065594
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86598239|gb|CI354856.1|CI354856
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86871756|gb|CI331133.1|CI331133
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         TTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAACTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88289742|gb|CI525074.1|CI525074
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86538752|gb|CI178958.1|CI178958
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88449112|gb|CI560573.1|CI560573
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|89173236|gb|CI721066.1|CI721066
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88480662|gb|CI417933.1|CI417933
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88909065|gb|CI716789.1|CI716789
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|11171889|gb|AU164011.1|AU164011
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86892185|gb|CI332232.1|CI332232
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88569078|gb|CI499795.1|CI499795
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88272458|gb|CI386313.1|CI386313
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|12404695|gb|AU166296.1|AU166296
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88298166|gb|CI558571.1|CI558571
EST:     TGTTGAAATCCATATTGGTGGTGGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGT-GCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88967306|gb|CI002494.1|CI002494
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86822549|gb|CI358056.1|CI358056
EST:     TGTTGAAATCCATATTGGTGGTGCAAA-GGACCTCCAGACA-G                         GTATTCATCATTAGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88670875|gb|CI724991.1|CI724991
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86259495|gb|CI065368.1|CI065368
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|109974656|gb|DT807029.1|DT807029
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|38481198|gb|CF965287.1|CF965287
EST:     TGTTGAAATCCATATAGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88219026|gb|CI220586.1|CI220586
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88834834|gb|CI370137.1|CI370137
EST:     TGTTGAAATCCATATTGGTGGTGGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGT-GCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88965917|gb|CI006713.1|CI006713
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTACTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88416822|gb|CI546101.1|CI546101
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTAATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88908657|gb|CI713215.1|CI713215
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|33681610|gb|CF309849.1|CF309849
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|218500721|gb|FG955417.1|FG955417
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         CTATTCATCATTGGACC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACC
EST: gi|86427538|gb|CI072635.1|CI072635
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88438054|gb|CI536213.1|CI536213
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|218499712|gb|FG957057.1|FG957057
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|32948414|gb|BP184986.1|BP184986
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88257817|gb|CI360403.1|CI360403
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88905253|gb|CI712552.1|CI712552
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88436265|gb|CI519184.1|CI519184
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88467895|gb|CI509710.1|CI509710
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88384437|gb|CI553929.1|CI553929
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86540904|gb|CI181110.1|CI181110
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88671954|gb|CI726070.1|CI726070
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88676705|gb|CI730818.1|CI730818
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88253685|gb|CI352311.1|CI352311
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88671098|gb|CI725214.1|CI725214
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88382593|gb|CI535801.1|CI535801
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88972443|gb|CI717183.1|CI717183
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88382548|gb|CI535756.1|CI535756
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88844719|gb|CI021294.1|CI021294
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88436914|gb|CI523864.1|CI523864
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|325493731|gb|JG458255.1|JG458255
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86540947|gb|CI181153.1|CI181153
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88594945|gb|CI715101.1|CI715101
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88840553|gb|CI080007.1|CI080007
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88668220|gb|CI722959.1|CI722959
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88373624|gb|CI506051.1|CI506051
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88374850|gb|CI520916.1|CI520916
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86835494|gb|CI347951.1|CI347951
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88668782|gb|CI719739.1|CI719739
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88675679|gb|CI729792.1|CI729792
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88418229|gb|CI501754.1|CI501754
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86836643|gb|CI347290.1|CI347290
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88262757|gb|CI366531.1|CI366531
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86535832|gb|CI176038.1|CI176038
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88223217|gb|CI223066.1|CI223066
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88462176|gb|CI511841.1|CI511841
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|15008152|gb|AU222540.1|AU222540
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|8335701|gb|BE040520.1|BE040520
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86420011|gb|CI054812.1|CI054812
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88449748|gb|CI539123.1|CI539123
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88269377|gb|CI380675.1|CI380675
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCT
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACC-AGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCT
EST: gi|58590818|gb|CF989126.1|CF989126
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|33685498|gb|CF313737.1|CF313737
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86542597|gb|CI182803.1|CI182803
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|218487806|gb|FG949430.1|FG949430
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88965918|gb|CI006714.1|CI006714
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTACTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88674861|gb|CI728974.1|CI728974
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|86540931|gb|CI181137.1|CI181137
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88992291|gb|CI035429.1|CI035429
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88970367|gb|CI383869.1|CI383869
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88365639|gb|CI543120.1|CI543120
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88846160|gb|CI372928.1|CI372928
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88272187|gb|CI388240.1|CI388240
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88380645|gb|CI521214.1|CI521214
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88567148|gb|CI497865.1|CI497865
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88566754|gb|CI497471.1|CI497471
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88319583|gb|CI518427.1|CI518427
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88542178|gb|CI471488.1|CI471488
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|88997570|gb|CI390234.1|CI390234
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACA-G                         GTATTCATCATTGGACCAATGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
EST: gi|218499923|gb|FG954899.1|FG954899
EST:     TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG                         GTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC
genomic: TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 50 (downstream exon)
Score: 5

TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcc ... cttaattcagGTATTCATCATTGGACCAGTGCAGGAAGTCAGAAAAGCTGAGGCTATCCTCCGAGGCCGCATGCTGGAGTTCTAGAGCAACAACCTTTTGTGATACCCCG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGgtaagtttcctagggcctttgtctgttgtaattaatatattcaattggttactggtcagtccacactccacagtcatgcttcactgacttactggctcca

- - - - - - -  TGGTGG
- - - - - - - - - - - GCAAAG