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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGTGGATATCCTGTCAGTCTTGGATGTGCCTCCTGGCAAAATGGGGCGTGTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatactaagtctgattttgtagatgttctctaaatctatattattctgtgaagctttatttattccttttcatttcaacgcatatttgcag

Basic information

species Oryza sativa
transcript LOC_Os01g38620.3
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os01g38620.1 (Oryza sativa), 5'ss of exon 8
lower sequence: GRMZM2G142984_T01 (Zea mays), 5'ss of exon 8
AGGTGGATATCCTGTCAGTCTTGGATGTGCCTCCTGGCAAAATGGGGCGTGTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatactaagtctgattttgtagatgttctctaaatctatattattctgtgaagctttatttattccttttcatttca-acgcatatttgcag
| |  ||||||||||||||||| |||||||||||||| |||||||| || |||||||||||||| || ||| | |||||||  ||||||| || ||||||||||| ||| | |||||||||||||| |  | |  | | |||||  | ||     || ||| ||| || |  | | ||||      | | |  ||||
AAGCCGATATCCTGTCAGTCTTAGATGTGCCTCCTGGGAAAATGGGACGAGTTATTGGCAGAAAGGGGTCAACGATAATGGCTGTGAAAGAATGTTGCAAgtaaatatattgagtctgattttgtaaacatcccatca-tctatgctgtt-----aaacttcattaatcctctgttattttttgttcctgtgggcag

upper sequence: LOC_Os01g38620.1 (Oryza sativa), 5'ss of exon 8
lower sequence: GRMZM2G081924_T01 (Zea mays), 5'ss of exon 8
AGGTGGATATCCTGTCAGTCTTGGATGTGCCTCCTGGCAAAATGGGGCGTGTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatactaagtctgattttgtagatgttctctaaatctatattattctgtgaagctttatttattcctttt--catttcaacgcatatttgcag
| || |||||||| |||||||| ||||| |||| ||| |||||||| || |||||||||||||| || ||| | |||||||  ||||||| |||||||||||||||||  | ||||||| || ||| |  | |     |||     ||| |||| || ||| ||| || |  | |    |||     | | |  ||||
AAGTTGATATCCTATCAGTCTTAGATGTTCCTCATGGGAAAATGGGACGAGTTATTGGCAGAAAGGGGTCAACGATAATGGTTGTGAAAGAATCTTGCAAgtaaacatcttgagtctgacttcgtaaacatacc----atcct--ctatgctgttaaacttcattaatcctctctgtttttttggttcctgtgggcag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88565766|gb|CI496483.1|CI496483
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88565207|gb|CI495924.1|CI495924
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88665783|gb|CI715939.1|CI715939
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|1632517|gb|C20246.1|C20246
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88847382|gb|CI011325.1|CI011325
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88202283|gb|CI202638.1|CI202638
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|5455349|gb|AU075592.1|AU075592
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|38475427|gb|CF959560.1|CF959560
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|218496740|gb|FG958327.1|FG958327
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88676820|gb|CI730933.1|CI730933
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86842694|gb|CI341824.1|CI341824
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88454736|gb|CI511708.1|CI511708
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88199815|gb|CI199665.1|CI199665
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86600577|gb|CI356334.1|CI356334
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|89185534|gb|CI052060.1|CI052060
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|4968690|gb|AU065594.1|AU065594
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86598239|gb|CI354856.1|CI354856
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86871756|gb|CI331133.1|CI331133
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88289742|gb|CI525074.1|CI525074
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86538752|gb|CI178958.1|CI178958
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88449112|gb|CI560573.1|CI560573
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|2797264|gb|AA750558.1|AA750558
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGGTATTC
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGGGTATTC
EST: gi|89173236|gb|CI721066.1|CI721066
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88480662|gb|CI417933.1|CI417933
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88909065|gb|CI716789.1|CI716789
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|11171889|gb|AU164011.1|AU164011
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86892185|gb|CI332232.1|CI332232
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88569078|gb|CI499795.1|CI499795
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88272458|gb|CI386313.1|CI386313
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|12404695|gb|AU166296.1|AU166296
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88298166|gb|CI558571.1|CI558571
EST:     TATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGGCAAAGGGACCTCCAGACAGG
genomic: TATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGT-GCAAAGGGACCTCCAGACAGG
EST: gi|88967306|gb|CI002494.1|CI002494
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86822549|gb|CI358056.1|CI358056
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAA-GGACCTCCAGACA-G
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88670875|gb|CI724991.1|CI724991
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86259495|gb|CI065368.1|CI065368
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|109974656|gb|DT807029.1|DT807029
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|38481198|gb|CF965287.1|CF965287
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATAGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88219026|gb|CI220586.1|CI220586
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88834834|gb|CI370137.1|CI370137
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGT-GCAAAGGGACCTCCAGACAGG
EST: gi|88965917|gb|CI006713.1|CI006713
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88416822|gb|CI546101.1|CI546101
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88908657|gb|CI713215.1|CI713215
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|33681610|gb|CF309849.1|CF309849
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCTTCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|218500721|gb|FG955417.1|FG955417
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86427538|gb|CI072635.1|CI072635
EST:     GGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88438054|gb|CI536213.1|CI536213
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|218499712|gb|FG957057.1|FG957057
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|32948414|gb|BP184986.1|BP184986
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88257817|gb|CI360403.1|CI360403
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88905253|gb|CI712552.1|CI712552
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88436265|gb|CI519184.1|CI519184
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88467895|gb|CI509710.1|CI509710
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88384437|gb|CI553929.1|CI553929
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86540904|gb|CI181110.1|CI181110
EST:     GTTATTGGCAGTAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88671954|gb|CI726070.1|CI726070
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88676705|gb|CI730818.1|CI730818
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88253685|gb|CI352311.1|CI352311
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAATTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88671098|gb|CI725214.1|CI725214
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88382593|gb|CI535801.1|CI535801
EST:     GTTATTGCCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88972443|gb|CI717183.1|CI717183
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88382548|gb|CI535756.1|CI535756
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88844719|gb|CI021294.1|CI021294
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88436914|gb|CI523864.1|CI523864
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|325493731|gb|JG458255.1|JG458255
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86540947|gb|CI181153.1|CI181153
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88594945|gb|CI715101.1|CI715101
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88840553|gb|CI080007.1|CI080007
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|27577933|gb|CB000628.1|CB000628
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGT
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGT
EST: gi|88668220|gb|CI722959.1|CI722959
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88373624|gb|CI506051.1|CI506051
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88374850|gb|CI520916.1|CI520916
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86835494|gb|CI347951.1|CI347951
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88668782|gb|CI719739.1|CI719739
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88675679|gb|CI729792.1|CI729792
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88418229|gb|CI501754.1|CI501754
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86836643|gb|CI347290.1|CI347290
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88262757|gb|CI366531.1|CI366531
EST:     GTTATTGGCAGAAAAGGATCATCAATAAT-GAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86535832|gb|CI176038.1|CI176038
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88223217|gb|CI223066.1|CI223066
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88462176|gb|CI511841.1|CI511841
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|15008152|gb|AU222540.1|AU222540
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|8335701|gb|BE040520.1|BE040520
EST:     AGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: AGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86420011|gb|CI054812.1|CI054812
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88449748|gb|CI539123.1|CI539123
EST:     ATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: ATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88269377|gb|CI380675.1|CI380675
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|58590818|gb|CF989126.1|CF989126
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|33685498|gb|CF313737.1|CF313737
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86542597|gb|CI182803.1|CI182803
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|218487806|gb|FG949430.1|FG949430
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88965918|gb|CI006714.1|CI006714
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88674861|gb|CI728974.1|CI728974
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|86540931|gb|CI181137.1|CI181137
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88992291|gb|CI035429.1|CI035429
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88970367|gb|CI383869.1|CI383869
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88365639|gb|CI543120.1|CI543120
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88846160|gb|CI372928.1|CI372928
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88272187|gb|CI388240.1|CI388240
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88380645|gb|CI521214.1|CI521214
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88567148|gb|CI497865.1|CI497865
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88566754|gb|CI497471.1|CI497471
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88319583|gb|CI518427.1|CI518427
EST:     GTTATTGGCAGAAGAGGATCATCAATAATGGAANTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88542178|gb|CI471488.1|CI471488
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|88997570|gb|CI390234.1|CI390234
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAATGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACA-G
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
EST: gi|218499923|gb|FG954899.1|FG954899
EST:     GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAA                         TGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG
genomic: GTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 52 (upstream exon), 75 (downstream exon)
Score: 415

AGGTGGATATCCTGTCAGTCTTGGATGTGCCTCCTGGCAAAATGGGGCGTGTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatac ... atatttgcagTGTTGAAATCCATATTGGTGGTGCAAAGGGACCTCCAGACAGG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
AGGTGGATATCCTGTCAGTCTTGGATGTGCCTCCTGGCAAAATGGGGCGTGTTATTGGCAGAAAAGGATCATCAATAATGGAAGTGAAAGCATCTTGCAAgtaaacatactaagtctgattttgtagatgttctctaaatctatattattctgtgaagctttatttattccttttcatttcaacgcatatttgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG