1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
...gtcttagtttccacaaacagcttcttgagttaattcatttttgtatttatctcttcactcggttacaacagcatataatcatgaattttcctgatttcagGCACTAATGTAAAGCTGGCAACCATTCCTTCAAGTGTTGTAGTGCTTGGCCCAGACAACTTTGACTCAATTGTTCTTGATGAAAACAAAGACATTCTTGT
species | Oryza sativa |
transcript | LOC_Os01g23740.1 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: AGGACAACGCAGTGCAGAGGCCCTTGCTGAATTTGTTAACACTGAAGGAG GCACTAATGTAAAGCTGGCAACCATTCCTTCAAGTGTTGTAGTGCTTGGCC
genomic: AGGACAACGCAGTGCAGAGGCCCTTGCTGAATTTGTTAACACTGAAGGAGgtaacacttc ... ctgatttcagGCACTAATGTAAAGCTGGCAACCATTCCTTCAAGTGTTGTAGTGCTTGGCC
tttatctcttcactcggttacaacagcatataatcatgaattttcctgatttcagGCACTAATGTAAAGCTGGCAACCATTCCTTCAAGTGTTGTAGTGCTTGGCCCAGACAACTTTGACTCAATTGTTCTTGATGAAAACAAAGACATTCTTGT
tcctgat putative branch site (score: 46)
ttttcct CT-rich tract
atataatcatgaattt TA-rich tract