1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
gtgggaaaccgtgatcgccaatccaaactttactatcacttgtcatcttacataatgaacgacttgtacttatacaatacttttttattttttttgcttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTTCAACCTTCTCTTCCTAAGGCGATGTCAAACTCCATTCTTATCTTTGGG
species | Oryza sativa |
transcript | LOC_Os01g23740.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: AGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88442528|gb|CI544095.1|CI544095
genomic: AGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: AAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|29613480|gb|CB618493.1|CB618493
genomic: AAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86601985|gb|CI258661.1|CI258661
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACAACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88965062|gb|CI097930.1|CI097930
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGCACGTCCTTEST: gi|88836436|gb|CI078333.1|CI078333
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86413125|gb|CI067530.1|CI067530
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86878476|gb|CI319666.1|CI319666
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86538091|gb|CI178297.1|CI178297
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88247610|gb|CI247459.1|CI247459
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|89183635|gb|CI046200.1|CI046200
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88266700|gb|CI377602.1|CI377602
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|87029638|gb|CI257433.1|CI257433
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|87034904|gb|CI188707.1|CI188707
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|87031239|gb|CI259819.1|CI259819
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88959312|gb|CI093007.1|CI093007
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|27548511|gb|CA766443.2|CA766443
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88446785|gb|CI526618.1|CI526618
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: TTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88250135|gb|CI249984.1|CI249984
genomic: TTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88270195|gb|CI381493.1|CI381493
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: CTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86603606|gb|CI112366.1|CI112366
genomic: CTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88266516|gb|CI377418.1|CI377418
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86538109|gb|CI178315.1|CI178315
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|89197971|gb|CI117449.1|CI117449
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86503530|gb|CI146163.1|CI146163
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88297767|gb|CI553396.1|CI553396
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: CAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88828953|gb|CI073823.1|CI073823
genomic: CAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86874759|gb|CI325270.1|CI325270
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88976785|gb|CI257527.1|CI257527
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|87016611|gb|CI275613.1|CI275613
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|86601984|gb|CI258660.1|CI258660
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ACAACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTEST: gi|88228403|gb|CI227883.1|CI227883
genomic: ACGACTATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
EST: ATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAG TCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
genomic: ATACCAAGAAGGAAACAGAGAGGCTTGAACGCATGTTGGAGAAGgtgggaaacc ... cttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTT
ataatgaacgacttgtacttatacaatacttttttattttttttgcttcctgcagTCCATCAGCCCATCAAAGGCCGATGAATTCATCATCAAGAAGAACGTCCTTTCAACCTTCTCTTCCTAAGGCGATGTCAAACTCCATTCTTATCTTTGGG
tacttttttatttttt CT-rich tract
acttgtacttatacaa TA-rich tract