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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTTACTGGGTTTGCGAGCTTGCTTAACCCAATCAACCATGGACTCTGGCCACGGTTTGCCCCCATCCTGGGCCACTCGAACCACTCACCAATGCATTCAGgtctctctctctctcccccaatccaattcattcatttcttttcactgactttcttctgcccttcatctgcag

Basic information

species Glycine max
transcript GLYMA20G39350.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192296925|gb|FG991936.1|FG991936
EST:     ACGGTTTGCCCCCATCCTGGGCCACTCGAACCACTCACCAATGCATTCAG                         TCTCAAAAGGACAATTATCACAAGTACCACAATACAGCCCAAGGCCGCATC
genomic: ACGGTTTGCCCCCATCCTGGGCCACTCGAACCACTCACCAATGCATTCAGgtctctctct ... tcatctgcagTCTCAAAAGGACAATTATCACAAGTACCACAATACAGCCCAAGGCCGCATC
EST: gi|22523265|gb|BU082076.1|BU082076
EST:     GAACCACTCACCAATGCATTCAG                         TCTCAAAAGGACAATTATCACAAGTACCACAATACAGCCCAAGGCCGCATC
genomic: GAACCACTCACCAATGCATTCAGgtctctctct ... tcatctgcagTCTCAAAAGGACAATTATCACAAGTACCACAATACAGCCCAAGGCCGCATC