1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTCTCTGCGAAGGGAAGCCTGTAGAGGGAAAAGTCATTGCTGGAAGCCCCGCAGTTCTTATCATAACTTCTTCTGCTTTAAGATGCATAGATCTCTTAAGgttctcatctctctaattctactctacaagcactgtatttctttaaccgaaaccctaattttatttaccgctgcag
species | Glycine max |
transcript | GLYMA20G39240.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCAGTTCTTATCATAACTTCTTCTGCTTTAAGATGCATAGATCTCTTAAG AGGCTTTCGCTCTATGACTGAACAATGCCATGCTGCAAAGTTATTCTCAAAEST: gi|193686944|gb|FK632539.1|FK632539
genomic: GCAGTTCTTATCATAACTTCTTCTGCTTTAAGATGCATAGATCTCTTAAGgttctcatct ... accgctgcagAGGCTTTCGCTCTATGACTGAACAATGCCATGCTGCAAAGTTATTCTCAAA
EST: GCAGTTCTTATCATAACTTCTTCTGCTTTAAGATGCATAGATCTCTTAAG AGGCTTTCGCTCTATGACTGAACAATGCCATGCTGCAAAGTTATTCTCAAAEST: gi|193518217|gb|FK473576.1|FK473576
genomic: GCAGTTCTTATCATAACTTCTTCTGCTTTAAGATGCATAGATCTCTTAAGgttctcatct ... accgctgcagAGGCTTTCGCTCTATGACTGAACAATGCCATGCTGCAAAGTTATTCTCAAA
EST: GCAGTTCTTATCATAACTTCTTCTGCTTTAAGATGCATAGATCTCTTAAG AGGCTTTCGCTCTATGACTGAACAATGCCATGCTGCAAAGTTATTCTCAAA
genomic: GCAGTTCTTATCATAACTTCTTCTGCTTTAAGATGCATAGATCTCTTAAGgttctcatct ... accgctgcagAGGCTTTCGCTCTATGACTGAACAATGCCATGCTGCAAAGTTATTCTCAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCTCTGCGAAGGGAAGCCTGTAGAGGGAAAAGTCATTGCTGGAAGCCCCGCAGTTCTTATCATAACTTCTTCTGCTTTAAGATGCATAGATCTCTTAAGgttctcatctctctaattctactctacaagcactgtatttctttaaccgaaaccctaattttatttaccgctgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG