1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTTTGAAATAATTTGTGAAGGTCAGTCTACTGTTACAGGGGATCAGAAGGCTACTAACCATCAGTTGAGAGGTTCCTTTGGCTTCCCAAGGTGGCTTGAGgtgatattctttatttaaaataaatttcttttttgtacaatatttatggctatggaaggaacttgaaaactagagagatttgaaagtcaaactaaaaagt...
species | Glycine max |
transcript | GLYMA20G36090.1 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: CTACTAACCATCAGTTGAGAGGTTCCTTTGGCTTCCCAAGGTGGCTTGAG GTGAGTCCTGCAACTGGTATAATAAGACCAGATCAAATTGTTGAAGTATCAEST: gi|17021751|gb|BM092785.1|BM092785
genomic: CTACTAACCATCAGTTGAGAGGTTCCTTTGGCTTCCCAAGGTGGCTTGAGgtgatattct ... tatgattcagGTGAGTCCTGCAACTGGTATAATAAGACCAGATCAAATTGTTGAAGTATCA
EST: CTACTAACCATCAGTTGAGAGGTTCCTTTGGCTTCCCAAGGTGGCTTGAG GTGAGTCCTGCAACTGGTATAATAAGACCAGATCAAATTGTTGAAGTATCAEST: gi|192330575|gb|FK021922.1|FK021922
genomic: CTACTAACCATCAGTTGAGAGGTTCCTTTGGCTTCCCAAGGTGGCTTGAGgtgatattct ... tatgattcagGTGAGTCCTGCAACTGGTATAATAAGACCAGATCAAATTGTTGAAGTATCA
EST: CTACTAACCATCAGTTGAGAGGTTCCTTTGGCTTCCCAAGGTGGCTTGAG GTGAGTCCTGCAACTGGTATAATAAGACCAGATCAAATTGTTGAAGTATCA
genomic: CTACTAACCATCAGTTGAGAGGTTCCTTTGGCTTCCCAAGGTGGCTTGAGgtgatattct ... tatgattcagGTGAGTCCTGCAACTGGTATAATAAGACCAGATCAAATTGTTGAAGTATCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTGAAATAATTTGTGAAGGTCAGTCTACTGTTACAGGGGATCAGAAGGCTACTAACCATCAGTTGAGAGGTTCCTTTGGCTTCCCAAGGTGGCTTGAGgtgatattctttatttaaaataaatttcttttttgtacaatatttatggctatggaaggaacttgaaaactagagagatttgaaagtcaaactaaaaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaataaa