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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAGgttagttgatgatctaattgattattgtctatatatatatatttccccttattcctcatttgatattctcttcctgttacattaaatatag

Basic information

species Glycine max
transcript GLYMA20G35970.1
intron # 12
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207737653|gb|GD714171.1|GD714171
EST:     GATATTCCTGTAAGTTCAGTTTCACGCCGATCTTCACAG                         GGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTTC
genomic: GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAGgttagttgat ... ttaaatatagGGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTAC
EST: gi|208072541|gb|GD869815.1|GD869815
EST:     GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAG                         GGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTAC
genomic: GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAGgttagttgat ... ttaaatatagGGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTAC
EST: gi|7926554|gb|AW832580.1|AW832580
EST:     GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAG                         GGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTAC
genomic: GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAGgttagttgat ... ttaaatatagGGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTAC
EST: gi|193515754|gb|FK473344.1|FK473344
EST:     GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAG                         GGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTAC
genomic: GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAGgttagttgat ... ttaaatatagGGATCACCAATGAGGAAATCTGCGAGTGTTGGTGATTGGATGGTGGATTAC
EST: gi|193621788|gb|FK568590.1|FK568590
EST:     GATATTCCTGTAAGTTCAGTTTCACGCCGATCTTCACAG                         GGATCACCAATGAGGAAATCTGCGAGTGTTGG
genomic: GATATTCCTGTAAGTTCAGTTTCGCGCCGATCTTCACAGgttagttgat ... ttaaatatagGGATCACCAATGAGGAAATCTGCGAGTGTTGG