Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|9984904|gb|BE659012.1|BE659012EST: GAGAACTTGAAGGCAAAGCAGACTCAATCAGCTACTGTTAAGAGGAGCAG ATGGAGGAAGTGATTGGACCCAGATTGTACTGTTGCTCTAATTGTAGAAAC
genomic: GAGAACTTGAAGGCAAAGCAGACTCAATCAGCTACTGTTAAGAGGAGCAGgtagctacaa ... tatatctcagATGGAGGAAGTGATTGGACCCAGATTGTACTGTTGCTCTAATTGTAGAAAC
EST:
gi|6964532|gb|AW433225.1|AW433225EST: GAGAACTTGAAGGCAAAGCAGACTCAATCAGCTACTGTTAAGAGGAGCAG ATGGAGGAAGTGATTGGACCCAGATTGTACTGTTGCTCTAATTGTAGAAAC
genomic: GAGAACTTGAAGGCAAAGCAGACTCAATCAGCTACTGTTAAGAGGAGCAGgtagctacaa ... tatatctcagATGGAGGAAGTGATTGGACCCAGATTGTACTGTTGCTCTAATTGTAGAAAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AGAGCAATCCCACATTCTGAGTGATTCAGGAAGCAGAGAGCCCTAAAAAGGAGAACTTGAAGGCAAAGCAGACTCAATCAGCTACTGTTAAGAGGAGCAGgtagctacaaattcagtttcaatttgtaattgaaaatcataattgattgaacactgaaaatgctatgttcatgctcatggtaaagtctttttcgttggaaaggattgatttgagataatattttatatctcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG