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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTAgtaagtgatgatacgtttacatttttctcttttgtttagtctgcattttctgaggaatttgttcgtattggttatttaaaataaccaatatattatgcgctcttcttttgtggaaaacattttttctcctttaaataatatactctatggttatgtgtttcctgcag

Basic information

species Glycine max
transcript GLYMA20G35750.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298183684|gb|HO028897.1|HO028897
EST:     CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCACGGCAACTA                         GACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA
genomic: CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTAgtaagtgatg ... tttcctgcagGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA
EST: gi|298165809|gb|HO008780.1|HO008780
EST:     CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTA                         GACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA
genomic: CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTAgtaagtgatg ... tttcctgcagGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA
EST: gi|298186716|gb|HO037349.1|HO037349
EST:     CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTA                         GACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA
genomic: CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTAgtaagtgatg ... tttcctgcagGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA
EST: gi|42722865|gb|CK768764.1|CK768764
EST:     CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTA                         GACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTC-AAACTTACCA
genomic: CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTAgtaagtgatg ... tttcctgcagGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA
EST: gi|298184021|gb|HO029234.1|HO029234
EST:     CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTA                         GACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA
genomic: CTGGTTACTTGGGTCAAAGATTTCTGGCATCTCTGTCATGGCAACTAgtaagtgatg ... tttcctgcagGACTTCAGTTTGAGAATAATTGTGAAGTTGGAGTCTTCTCAAAACTTACCA