Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|19934465|gb|BQ079495.1|BQ079495EST: CATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCAAGCAG GCCTTCTAAGGTGTGGGAAAAGCTGCAGACTCCGCTGGATTAACTATTTGA
genomic: CATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCAAGCAGgtatttctat ... aattgctcagGCCTTCTAAGGTGTGGGAAAAGCTGCAGACTCCGCTGGATTAACTATTTGA
EST:
gi|151408831|gb|EV278639.1|EV278639EST: CATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCAAGCAG GCCTTCTAAGGTGTGGGAAAAGCTGCAGACTCCGCTGGATTAACTATTTGA
genomic: CATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCAAGCAGgtatttctat ... aattgctcagGCCTTCTAAGGTGTGGGAAAAGCTGCAGACTCCGCTGGATTAACTATTTGA
EST:
gi|151412894|gb|EV282706.1|EV282706EST: CATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCAAGCAG GCCTTCTAAGGTGTGGGAAAAGCTGCAGACTCCGCTGGATTAACTATTTGA
genomic: CATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCAAGCAGgtatttctat ... aattgctcagGCCTTCTAAGGTGTGGGAAAAGCTGCAGACTCCGCTGGATTAACTATTTGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTGAAGAAGGGTCCTTGGGCTACCGAGGAAGATCAAATTCTCACATCTTACATCCAAAAACATGGCCATGGCAATTGGCGTGCCCTCCCAAAGCAAGCAGgtatttctatagttctataattacttcaattgaacaaatattatctccaatttatgacatgcttttatacaccatagtatgtgtataaatggcctagcct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG