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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCTTGTATCTGGGGCTTTCTACTCCAATTCTATATGATTTTTACAACTATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAGgtatgtgaaaactattgttatttcatgtgtttctatctaatgattttacctgtgtaacttaatataatgtgttcactttggatggcag

Basic information

species Glycine max
transcript GLYMA20G34490.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|214005010|gb|DB985648.1|DB985648
EST:     ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAG                         AGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
genomic: ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAGgtatgtgaaa ... tggatggcagAGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
EST: gi|192318942|gb|FK006838.1|FK006838
EST:     ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAG                         AGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
genomic: ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAGgtatgtgaaa ... tggatggcagAGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
EST: gi|120529164|gb|EH257298.1|EH257298
EST:     ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAG                         AGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
genomic: ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAGgtatgtgaaa ... tggatggcagAGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
EST: gi|22933850|gb|BU550989.1|BU550989
EST:     ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAG                         AGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
genomic: ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAGgtatgtgaaa ... tggatggcagAGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
EST: gi|192329478|gb|FK022198.1|FK022198
EST:     ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAG                         AGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG
genomic: ATAGATCTAATAACCCTGAATACTATTTACTGCTGAATGATTTCATTCAGgtatgtgaaa ... tggatggcagAGCACAGCACTTTGTGGTGCATTGCTATTTTTTATAGAGATGAAGTACTCG