1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATTCGTCTGGCACTTCTGCGACTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAATgtgagggtttcgtatcttttattgttctgccgctttttaatctcttcgcacgctgcaatagttggctgatttagctagttggtgcatctttgttatacgg...
species | Glycine max |
transcript | GLYMA20G34100.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAAT GTTGACTATGTATGTACGCCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGTEST: gi|192297746|gb|FG989607.1|FG989607
genomic: CTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAATgtgagggttt ... tatgtttcagGTTGACTATGCATGTACGCCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGT
EST: CTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAAT GTTGACTATGCATGTACGCCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGTEST: gi|254323743|gb|GR836082.1|GR836082
genomic: CTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAATgtgagggttt ... tatgtttcagGTTGACTATGCATGTACGCCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGT
EST: CTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAAT GTTGACTATGCATGTACGCCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGTEST: gi|151412042|gb|EV281854.1|EV281854
genomic: CTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAATgtgagggttt ... tatgtttcagGTTGACTATGCATGTACGCCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGT
EST: CTCAAGTTGAAAGGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAAT GTTGACTATGCATGTACGCCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGT
genomic: CTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAATgtgagggttt ... tatgtttcagGTTGACTATGCATGTACGCCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTCGTCTGGCACTTCTGCGACTCAAGTTGAAAAGGAGGAAGTGGATGCTCGATCAATCTATGTTGGTAATgtgagggtttcgtatcttttattgttctgccgctttttaatctcttcgcacgctgcaatagttggctgatttagctagttggtgcatctttgttatacgg
- - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - AGTGGA