1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgattaccccatttcttttctctcttgctttggattttgcactgcatctaaatagaatcctaatcttcccttatgaatagtaacaaaacattaggc...
species | Glycine max |
transcript | GLYMA20G33580.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|192302699|gb|FG993719.1|FG993719
genomic: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|120491293|gb|EH219460.1|EH219460
genomic: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|192302698|gb|FG993718.1|FG993718
genomic: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|192302196|gb|FG997276.1|FG997276
genomic: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: ATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|8827104|gb|BE210834.1|BE210834
genomic: ATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: GGTGAAACAGATCAAATCAGCAGTGCTAT-CTCTTCC-A-G GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|298163106|gb|HO011839.1|HO011839
genomic: GGTGAAACAGATCAAATCAGCATT-CTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|120491336|gb|EH219503.1|EH219503
genomic: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|151400704|gb|EV270518.1|EV270518
genomic: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTTEST: gi|192302195|gb|FG997275.1|FG997275
genomic: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
EST: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAG GTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
genomic: GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgatta ... tatacctcagGTATTTAAGAAGTCAAAGATAGTGGAATACAGTATCAAAGAAAATATGGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGAAACAGATCAAATCAGCATTCTATACTCTTCCCAAGgttttgattaccccatttcttttctctcttgctttggattttgcactgcatctaaatagaatcctaatcttcccttatgaatagtaacaaaacattaggc
- - - - AGATCA