Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCCTGCAACTGTTTTAGTTCCAGAAGTGGAAGTTCCCAAGTGGGGTGCTGTGTATATTCCTTCTATCATTACACTCCTTAATGCAGTTGGAACTCCAAGgtaagcatttttaagttggaaaaacttggtaaacaaggttttctttgttcatttgtgatgtgagtaacttgtgtacatcttgtgcag

Basic information

species Glycine max
transcript GLYMA20G32990.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G32990.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv13s0074g00500.t01 (Vitis vinifera), 5'ss of exon 7
TGCCTGCAACTGTTTTAGTTCCAGAAGTGGAAGTTCCCAAGTGGGGTGCTGTGTATATTCCTTCTATCATTACACTCCTTAATGCAGTTGGAACTCCAAGgtaagcatttttaagttggaaaaacttggta--aacaaggttttctttgttcatttgtgatgtgagtaacttgtgtacatcttgtgcag-----------
| ||||||||||||||  | || |||||||||||||||| |||||| ||||| ||||||||||||| |||||| || || |||||||||||||||||||||||    ||  |   | ||||| | ||  ||  | |  | ||| | | | |   |  || | | |  |   |     || |  |  ||            
TCCCTGCAACTGTTTTTTTCCCTGAAGTGGAAGTTCCCATGTGGGGAGCTGTCTATATTCCTTCTACCATTACTCTTCTGAATGCAGTTGGAACTCCAAGgtagcttttcctctctaggaaatatttcttattatcctgttttccgtggatttatgttggtttcaaaactataatcccaccaagaacatgcccagatttt