Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|151396580|gb|EV266457.1|EV266457EST: ATACTGCGAGGAGATCTTTTCCTATTGCATCCAGATCCAATCTCAGCATG ATGGAGCGGGGTTGCCATGGTCTTGAACGTGTGACTGTAGCCAAATTTCCA
genomic: ATACTGCGAGGAGATCTTTTCCTATTGCATCCAGATCCAATCTCAGCATGgtgaacattt ... ctgtgttcagATGGAGCGGGGTTGCCATGGTCTTGAACGTGTGACTGTAGCCAAATTTCCA
EST:
gi|298178110|gb|HO027493.1|HO027493EST: ATACTGCGAGGAGATCTTTTCCTATTGCATCCAGATCCAATCTCAGCATG ATGGAGCGGGGTTGCCATGGTCTTGAACGTGTGACTGTA
genomic: ATACTGCGAGGAGATCTTTTCCTATTGCATCCAGATCCAATCTCAGCATGgtgaacattt ... ctgtgttcagATGGAGCGGGGTTGCCATGGTCTTGAACGTGTGACTGTA
EST:
gi|151406688|gb|EV276503.1|EV276503EST: ATACTGCGAGGAGATCTTTTCCTATTGCATCCAGATCCAATCTCAGCATG ATGGAGCGGGGTTGCCATGGTCTTGAACGTGTGACTGTAGCCAAATTTCCA
genomic: ATACTGCGAGGAGATCTTTTCCTATTGCATCCAGATCCAATCTCAGCATGgtgaacattt ... ctgtgttcagATGGAGCGGGGTTGCCATGGTCTTGAACGTGTGACTGTAGCCAAATTTCCA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTTCATTGTTTTCGTCTGCACCAGGCTCATATGTGCACGAATTCACATGAATACTGCGAGGAGATCTTTTCCTATTGCATCCAGATCCAATCTCAGCATGgtgaacattttttatatgttttcaagtttttcttaataatttcattgtctgggttattttttttggagttcaagttctatccactgtcagtgtattttaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC