1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACTCCAAAAGGAATTAATGACTCTCATGgtatatctcttttttacttaaattatgattgttgttattatttttatggaccttttttcttgaattccctgcatctctttacgctttttgtagaatcaat...
species | Glycine max |
transcript | GLYMA20G31920.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAGACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|208323197|gb|GE123952.1|GE123952
genomic: GAGACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: TTTCTCAGAGACTCCAAAAGGAATTAATGACTCTCATG TTGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|8285774|gb|BE023333.1|BE023333
genomic: TTTCTCAGAGACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|9901119|gb|BE610087.1|BE610087
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|37996736|gb|CF808325.1|CF808325
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|298194301|gb|HO040949.1|HO040949
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|6964528|gb|AW433221.1|AW433221
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATAEST: gi|21637783|gb|BM107938.1|BM107938
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|298179578|gb|HO028049.1|HO028049
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|298172997|gb|HO019996.1|HO019996
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCACG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATTEST: gi|298170339|gb|HO018963.1|HO018963
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
EST: ACTCCAAAAGGAATTAATGACTCTCATG ATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
genomic: ACTCCAAAAGGAATTAATGACTCTCATGgtatatctct ... tttcctgcagATGAGTGGAGGAGATCTTGGGGTATCGGCTTTTCCTGATGGGGAGAGTATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTCCAAAAGGAATTAATGACTCTCATGgtatatctcttttttacttaaattatgattgttgttattatttttatggaccttttttcttgaattccctgcatctctttacgctttttgtagaatcaat
- - - AAGGAA