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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTACAATGGCAACGCAATCTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTGgtaagtattcaactctcctatgctttccgttctatcaaagtccgcttcacacttgttgtttcaattttccaatcttgtag

Basic information

species Glycine max
transcript GLYMA20G31230.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298173741|gb|HO017077.1|HO017077
EST:     ATCTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTG                         GACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG
genomic: ATCTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTGgtaagtattc ... aatcttgtagGACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG
EST: gi|31307814|gb|CD393017.1|CD393017
EST:     TAAACACTTTTCGTGTTCATGCGGGAATCAGTG                         GACGGCAATGCAAACCTTCAATATTCAAACCAAGCCATTTTGGCTTTAGGG
genomic: TAAACACTTTTCGTGTTCATGCGGGAATCAGTGgtaagtattc ... aatcttgtagGACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG
EST: gi|19268669|gb|BM884925.1|BM884925
EST:     ATCTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTG                         GACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG
genomic: ATCTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTGgtaagtattc ... aatcttgtagGACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG
EST: gi|23056828|gb|BU577800.1|BU577800
EST:     CTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTG                         GACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG
genomic: CTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTGgtaagtattc ... aatcttgtagGACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG
EST: gi|151401549|gb|EV271363.1|EV271363
EST:     ATCTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTG                         GACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG
genomic: ATCTTATCTTCTGAATCTAAACACTTTTCGTGTTCATGCGGGAATCAGTGgtaagtattc ... aatcttgtagGACGGCAATGCAAGCCTTCAATATTCAAACCAAGCAATTTTGGCTTTAGGG