1 5' 3' | 2 5' 3' | 3 5' 3' |
CACGCTGGGAACGAGAAATCTTGCGTTTGGCACGCTAGGGATTTTGCTGATGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtgcctttttttggagctaataatattttattgaagatatttttcgtttagttctgttgctaatgtgtttggtgtttttgtggttctctttat...
species | Glycine max |
transcript | GLYMA20G31070.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGGEST: gi|151396243|gb|EV266120.1|EV266120
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGGEST: gi|192333111|gb|FK026440.1|FK026440
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGGEST: gi|23727133|gb|BU761585.1|BU761585
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGGEST: gi|298165930|gb|HO008901.1|HO008901
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGEST: gi|209718189|gb|BW657821.1|BW657821
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGGEST: gi|192298957|gb|FG987702.1|FG987702
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGTAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGGEST: gi|254337710|gb|GR845280.1|GR845280
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGGEST: gi|254339435|gb|GR848193.1|GR848193
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCG-TTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGGEST: gi|7030389|gb|AW460172.1|AW460172
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTGTCTGCGTCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAGGAAGTTGCTGAATCCCAGAAGGEST: gi|254337711|gb|GR845281.1|GR845281
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
EST: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAA ATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
genomic: TGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtg ... tctttgttagATTGCAAAAGCTTCATGGAAACATTCCAAGAAGTTGCTGAATCCCAGAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACGCTGGGAACGAGAAATCTTGCGTTTGGCACGCTAGGGATTTTGCTGATGGTGAACTCAAGGACGAGCTTTTCTGCATCCGTTTTCCTTCTATTGAAAgtgagttgtgcctttttttggagctaataatattttattgaagatatttttcgtttagttctgttgctaatgtgtttggtgtttttgtggttctctttat
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