1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GTGGCTATGGAACTTTGGGCAAGATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGgtctgcatccaatttttcatattttttttgtgatttgattcgatcaattattttagacaattcaccaagaaaattgaataattaagagttatttttattatttatcttattcaataataataataaaaaaaaaaacatgagcttgagttgttgctttgcag
species | Glycine max |
transcript | GLYMA20G30230.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAG TCACACCATCGACCAAGAGAGGGACCGNTCGAGCTTAACGACGTTTTTGCGEST: gi|120492766|gb|EH220933.1|EH220933
genomic: GATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGgtctgcatcc ... tgctttgcagTCACACCATCGACCAAGAGAGGGACCGTTCGAGCTTAACGACGTTTTTGCG
EST: GATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAG TCACACCATCGACCAAGAGAGGGACCGTTCGAGCTTAACGACGTTNTTGCGEST: gi|31311683|gb|CD396886.1|CD396886
genomic: GATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGgtctgcatcc ... tgctttgcagTCACACCATCGACCAAGAGAGGGACCGTTCGAGCTTAACGACGTTTTTGCG
EST: GGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAG TCACACCATCGACCAAGAGAGGGACCGTTCGAGCTTAACGACGTTTTTGCG
genomic: GGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGgtctgcatcc ... tgctttgcagTCACACCATCGACCAAGAGAGGGACCGTTCGAGCTTAACGACGTTTTTGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGCTATGGAACTTTGGGCAAGATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGgtctgcatccaatttttcatattttttttgtgatttgattcgatcaattattttagacaattcaccaagaaaattgaataattaagagttatttttattatttatcttattcaataataataataaaaaaaaaaacatgagcttgagttgttgctttgcag
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