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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataacattttgctgtggttattgttttaaataaaaattaagtaattaattttatttgtttgtgctctgctctgctcattagagagtccaaatga...

Basic information

species Glycine max
transcript GLYMA20G30110.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208180362|gb|GD974949.1|GD974949
EST:     CATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: CATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193587868|gb|FK543491.1|FK543491
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208185877|gb|GD985386.1|GD985386
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208178376|gb|GD978329.1|GD978329
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|58019754|gb|CX706496.1|CX706496
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208173402|gb|GD971619.1|GD971619
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|207826182|gb|GD799013.1|GD799013
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193535766|gb|FK492660.1|FK492660
EST:     GCGAACGTTTAACTGTGTCATCCTTCTGT-G                         GCGT-GGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: GCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208047088|gb|GD846089.1|GD846089
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTACAACTGTTTTGGTG
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCT-CAACTGTTTTGGTG
EST: gi|193414590|gb|FK379298.1|FK379298
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|207745935|gb|GD720615.1|GD720615
EST:     TCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: TCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|192303434|gb|FG997464.1|FG997464
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTC--T--                         GCGTAGGCTTTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193340553|gb|FK305850.1|FK305850
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|6725606|gb|AW310005.1|AW310005
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|192303062|gb|FG994180.1|FG994180
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|207821229|gb|GD792268.1|GD792268
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193301526|gb|FK267707.1|FK267707
EST:     TGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: TGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193332115|gb|FK302003.1|FK302003
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAA
EST: gi|208067998|gb|GD863622.1|GD863622
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193544873|gb|FK501714.1|FK501714
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTTGTTTT
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACT-GTTTT
EST: gi|208318068|gb|GE116751.1|GE116751
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGG
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGG
EST: gi|207783779|gb|GD756451.1|GD756451
EST:     GACAAAGCATCACTACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: GGCAAAGCATCAC-ACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208106766|gb|GD902327.1|GD902327
EST:     GGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAAG                         GCGTAGGCTCT
genomic: GGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTA-Ggtaaacataa ... catcgggcagGCGTAGGCTCT
EST: gi|193464444|gb|FK430986.1|FK430986
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCT
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCT
EST: gi|193533566|gb|FK490331.1|FK490331
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193497172|gb|FK462100.1|FK462100
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTT
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTT
EST: gi|193552415|gb|FK509004.1|FK509004
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAG
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAG
EST: gi|193555314|gb|FK511013.1|FK511013
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGT
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGT
EST: gi|208333718|gb|GE132027.1|GE132027
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTG---                         -CGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTG
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTG
EST: gi|208044271|gb|GD838819.1|GD838819
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCGACTGTTTTGGTGAGACTAAAATTTGCTGAG
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAG
EST: gi|208166989|gb|GD962051.1|GD962051
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208125791|gb|GD922025.1|GD922025
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTG
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTG
EST: gi|208126274|gb|GD924720.1|GD924720
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGT
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGT
EST: gi|193599510|gb|FK552467.1|FK552467
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|192303433|gb|FG997463.1|FG997463
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTC--T--                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208259350|gb|GE055866.1|GE055866
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGT
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGT
EST: gi|192334205|gb|FK026586.1|FK026586
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193703715|gb|FK634701.1|FK634701
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|5175569|gb|AI759902.1|AI759902
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|298174869|gb|HO014786.1|HO014786
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAA                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208181417|gb|GD978086.1|GD978086
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193350398|gb|FK317458.1|FK317458
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGA
EST: gi|208198139|gb|GD996350.1|GD996350
EST:     GGCAAAGCATCACACCAATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACNGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: GGCAAAGCATCACA-CTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193523642|gb|FK477831.1|FK477831
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGCTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|254315762|gb|GR825571.1|GR825571
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193327468|gb|FK292915.1|FK292915
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|58016200|gb|CX702942.1|CX702942
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208171399|gb|GD967974.1|GD967974
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208263848|gb|GE065256.1|GE065256
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|254317398|gb|GR826343.1|GR826343
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193529678|gb|FK483973.1|FK483973
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|298198944|gb|HO042307.1|HO042307
EST:     AGGCAAAGCATCACACTGTGCGAACGTTTAACTGTGTCAACCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193595487|gb|FK554352.1|FK554352
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTG
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTG
EST: gi|208329682|gb|GE130507.1|GE130507
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193722833|gb|FK657451.1|FK657451
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAG
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAG
EST: gi|13477459|gb|BG507339.1|BG507339
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208094480|gb|GD897033.1|GD897033
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|192303063|gb|FG994181.1|FG994181
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|254315761|gb|GR825570.1|GR825570
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|207747234|gb|GD718371.1|GD718371
EST:     AGGCAAAGCATCACACTACGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|207780295|gb|GD752664.1|GD752664
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193569357|gb|FK527116.1|FK527116
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193710885|gb|FK641786.1|FK641786
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193423581|gb|FK387246.1|FK387246
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193653082|gb|FK596406.1|FK596406
EST:     TGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: TGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208268284|gb|GE067235.1|GE067235
EST:     TCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: TCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193407829|gb|FK373149.1|FK373149
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193542662|gb|FK499307.1|FK499307
EST:     GCGAACGTTTAACTGTGTTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: GCGAACGTTTAACTGTG-TCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208289560|gb|GE085867.1|GE085867
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193601678|gb|FK553517.1|FK553517
EST:     GGCAAAGCATCACACTTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: GGCAAAGCATCACAC-TATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193601759|gb|FK554788.1|FK554788
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCT
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCT
EST: gi|193341527|gb|FK308867.1|FK308867
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGNGAGA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGA
EST: gi|208241917|gb|GE040649.1|GE040649
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|207833478|gb|GD806723.1|GD806723
EST:     ACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: ACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|22932658|gb|BU549797.1|BU549797
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193496971|gb|FK459477.1|FK459477
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193541182|gb|FK498738.1|FK498738
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193355342|gb|FK319927.1|FK319927
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208200904|gb|GD997367.1|GD997367
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|208165147|gb|GD965039.1|GD965039
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193611512|gb|FK560804.1|FK560804
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193426090|gb|FK390391.1|FK390391
EST:     AGGCAAAGCATCACACTCTGCGAACGCTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGCGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193517803|gb|FK475360.1|FK475360
EST:     AGGTAAAGCATCACACTATGCGAACGTTTAACTGTGTCNTCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAA-TTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|58022797|gb|CX709538.1|CX709538
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
EST: gi|193602247|gb|FK556214.1|FK556214
EST:     AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAG                         GCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA
genomic: AGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataa ... catcgggcagGCGTAGGCTCTCAACTGTTTTGGTGAGACTAAAATTTGCTGAGCACTTGAA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CTACAACATGGGTGTGATTCCAACCAGGCAAAGCATCACACTATGCGAACGTTTAACTGTGTCATCCTTCTGTAGgtaaacataacattttgctgtggttattgttttaaataaaaattaagtaattaattttatttgtttgtgctctgctctgctcattagagagtccaaatga

- - - - - - - - - - - - -  GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaataaaa