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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGTGTATCGCGGTGTTCATGTGGCAGACTCATCCAAAGTACCCCTTGATTCTCTTACACAACAGGGACGAGTTTTATTCTCGgtgagtgagtactcgttcatttcgttttctgaattatgaatagaaacaaatggataatttatttatttaatcgttgagtgttgaaacttgaaag

Basic information

species Glycine max
transcript GLYMA20G02900.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298193028|gb|HO033406.1|HO033406
EST:     CCAAAGTACCCCTTGATTCTCTTACACAACAGGGACGAGTTTTATTCTCG                         GCCTACGGAACCATTGGCGTGGTGGGAAGGGGAAACGATCTTGGGTGGTAA
genomic: CCAAAGTACCCCTTGATTCTCTTACACAACAGGGACGAGTTTTATTCTCGgtgagtgagt ... aacttgaaagGCCTACGGAACCATTGGCGTGGTGGGAAGGGGAAACGATCTTGGGTGGTAA
EST: gi|298165614|gb|HO011663.1|HO011663
EST:     CCAAAGTACCCCTTGATTCTCTTACACAACAGGGACGAGTTTTATTCTCG                         GCCTACGGAACCATTGGCGTGGTGGGAAGGGGAAACGATCTTGGGTGGTAA
genomic: CCAAAGTACCCCTTGATTCTCTTACACAACAGGGACGAGTTTTATTCTCGgtgagtgagt ... aacttgaaagGCCTACGGAACCATTGGCGTGGTGGGAAGGGGAAACGATCTTGGGTGGTAA