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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGTGGGAGGAGTATCGAGAAGTCAGGCCCAGGACTCCGTTTGAGTCCACGCTTGCCCGCCCTAATTCCAAAATAAGAATCGGTGAATCGTTGCGTCCGgtaataacatgcacacctcactgtatgctttgttttctttatatgcatgtagggattgtattagatgagaacatgatttcgctacaggaactaatcttga...

Basic information

species Glycine max
transcript GLYMA20G02780.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19346961|gb|BM891841.1|BM891841
EST:     CGCTTGCCCGCCCTAATTCCAAAATAAGAATCGGTGAATCGTTGCGTCCG                         GAGGATGTAAAGGATTGGACAACTGATGTTCTCATGGATGCTCTCCATAGA
genomic: CGCTTGCCCGCCCTAATTCCAAAATAAGAATCGGTGAATCGTTGCGTCCGgtaataacat ... ctgtgtacagGAGGATGTAAAGGATTGGACAACTGATGTTCTCATGGATGCTCTCCATAGA
EST: gi|298169842|gb|HO018466.1|HO018466
EST:     CGCTTGCCCGCCCTAACTCCAAAATAAGAATCGGTGAATCGTTGCGTCCG                         GAGGATGTAAAGGATTGGACAACTGATGTTCTCATGGATGCTCTCCATAGA
genomic: CGCTTGCCCGCCCTAATTCCAAAATAAGAATCGGTGAATCGTTGCGTCCGgtaataacat ... ctgtgtacagGAGGATGTAAAGGATTGGACAACTGATGTTCTCATGGATGCTCTCCATAGA
EST: gi|51341870|gb|CO983187.1|CO983187
EST:     CGCTTGCCCGCCCTAATTCCAAAATAAGAATCGGTGAATCGTTGCGTCCG                         GAGGATGTAAAGGATTGGACAACTGATGTTCTCATGGATGCTCTCCATAGA
genomic: CGCTTGCCCGCCCTAATTCCAAAATAAGAATCGGTGAATCGTTGCGTCCGgtaataacat ... ctgtgtacagGAGGATGTAAAGGATTGGACAACTGATGTTCTCATGGATGCTCTCCATAGA