1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ACTCCCCAGCAAGCTCAGGAAGTACATGTAGCTGTTCGAGATTGGCTAAAAAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtttattttacctatagttgcattgtgaacttattacggtgttgtggaaatttaagataccacttaatacggttgcatgtctttttagttaat...
species | Glycine max |
transcript | GLYMA19G36990.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAG GGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTGEST: gi|10233922|gb|BE802810.1|BE802810
genomic: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtt ... ctgttttcagGGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTG
EST: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAG GGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTGEST: gi|12689031|gb|BG155376.1|BG155376
genomic: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtt ... ctgttttcagGGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTG
EST: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAG GGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCTGAGCACGAAGATATTGEST: gi|193584039|gb|FK542021.1|FK542021
genomic: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtt ... ctgttttcagGGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTG
EST: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAG GGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTGEST: gi|208133811|gb|GD929588.1|GD929588
genomic: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtt ... ctgttttcagGGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTG
EST: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAG GGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTGEST: gi|208284861|gb|GE082035.1|GE082035
genomic: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtt ... ctgttttcagGGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTG
EST: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAG GGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTGEST: gi|193537682|gb|FK497615.1|FK497615
genomic: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtt ... ctgttttcagGGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTG
EST: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAG GGTCTGTAAATGGAGGGAGCAGTGCTGAGCTAGCAAAGCAAGAAGATATTG
genomic: AAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtt ... ctgttttcagGGTCTGTAAATGGAGGGAACAGTGCTGAGCTAGCAAAGCAAGAAGATATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTCCCCAGCAAGCTCAGGAAGTACATGTAGCTGTTCGAGATTGGCTAAAAAAGAATGTCCCTGATGAAGTTGCATCTAAAACGCGAATTATTTATGGAGgtaaattgtttattttacctatagttgcattgtgaacttattacggtgttgtggaaatttaagataccacttaatacggttgcatgtctttttagttaat
- - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA