1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTCAGTGGAGTTGCTTTCGATTCATATTGGTCATCTCCAAATTCAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAGgtactcagaaaaatgtttcattataatatttactttttctatgtgtagcttttcagcctatgtaaaactcatcaatatacctaacatagatggatctgtg...
species | Glycine max |
transcript | GLYMA19G36480.2 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAG GATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCCEST: gi|17024042|gb|BM095076.1|BM095076
genomic: CAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAGgtactcagaa ... tggtggtcagGATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCC
EST: CAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAG GATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCCEST: gi|208103565|gb|GD903136.1|GD903136
genomic: CAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAGgtactcagaa ... tggtggtcagGATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCC
EST: TGTATCGTTTTGGTTCTGTTGGTCAG GATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCCEST: gi|254322356|gb|GR837770.1|GR837770
genomic: TGTATCGTTTTGGTTCTGTTGGTCAGgtactcagaa ... tggtggtcagGATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCC
EST: CAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAG GATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCC
genomic: CAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAGgtactcagaa ... tggtggtcagGATACACAATTGCTTCTATGGGACCTGGAAATGGACGAGATTGTAGTGCCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCAGTGGAGTTGCTTTCGATTCATATTGGTCATCTCCAAATTCAAATGACAATGGAGAGACTATTATGTATCGTTTTGGTTCTGTTGGTCAGgtactcagaaaaatgtttcattataatatttactttttctatgtgtagcttttcagcctatgtaaaactcatcaatatacctaacatagatggatctgtg
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