Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGTGGGCTGACAAGTCATACAAAAAGTCTCATCTTGGAAATGAATGGAAGAAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaatataactcgtactgtgttgcatttacttgcatactttctcaattagatcatctggtgttaagaaattattatgttattctatctgcag

Basic information

species Glycine max
transcript GLYMA19G36250.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31463685|gb|CD405713.1|CD405713
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|7285057|gb|AW597544.1|AW597544
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|192331181|gb|FK020948.1|FK020948
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|12691424|gb|BG157760.1|BG157760
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|31465409|gb|CD407437.1|CD407437
EST:     AAGCCTTTTGCTGGTTCATCCCATGCNAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|151410705|gb|EV280520.1|EV280520
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|213598822|gb|DB968293.1|DB968293
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|12689923|gb|BG156259.1|BG156259
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|192301152|gb|FG988017.1|FG988017
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|298181192|gb|HO022631.1|HO022631
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|7590861|gb|AW706604.1|AW706604
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGGTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|151411715|gb|EV281526.1|EV281526
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|15204233|gb|BI427001.1|BI427001
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|298170932|gb|HO015908.1|HO015908
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|213604592|gb|DB966679.1|DB966679
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|192331029|gb|FK020249.1|FK020249
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|9564040|gb|BE473549.1|BE473549
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|12690049|gb|BG156385.1|BG156385
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|31463644|gb|CD405672.1|CD405672
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|38193923|gb|CF923129.1|CF923129
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|213614686|gb|DB970747.1|DB970747
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTG
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTG
EST: gi|9203751|gb|BE329975.1|BE329975
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|38192612|gb|CF921818.1|CF921818
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|15664500|gb|BI701871.1|BI701871
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|16280693|gb|BI944097.1|BI944097
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|13479574|gb|BG508917.1|BG508917
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|192331180|gb|FK020947.1|FK020947
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|7686003|gb|AW756651.1|AW756651
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|15661759|gb|BI699130.1|BI699130
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|31463628|gb|CD405656.1|CD405656
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAACCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|7692145|gb|AW760259.1|AW760259
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|8827366|gb|BE211096.1|BE211096
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|22930605|gb|BU547752.1|BU547752
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|38191834|gb|CF921040.1|CF921040
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGCGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|15285174|gb|BI469065.1|BI469065
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|41146089|gb|CK606300.1|CK606300
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|20498352|gb|BQ273282.1|BQ273282
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|16342347|gb|BI967942.1|BI967942
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|214005463|gb|DB985529.1|DB985529
EST:     AGCTCTCATG-TGGTTAAACCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AGC-CTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|192296979|gb|FG991960.1|FG991960
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|22931295|gb|BU548434.1|BU548434
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|120532758|gb|EH260891.1|EH260891
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|38191888|gb|CF921094.1|CF921094
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGCGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|6718905|gb|AW306552.1|AW306552
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|4283798|gb|AI440701.1|AI440701
EST:     GCTGGTTCATACCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: GCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|12773406|gb|BG238333.1|BG238333
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|21678468|gb|BQ630819.1|BQ630819
EST:     AAGCCTTTTGTTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|15661617|gb|BI698988.1|BI698988
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|38193340|gb|CF922546.1|CF922546
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|298172611|gb|HO019651.1|HO019651
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|17023602|gb|BM094636.1|BM094636
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|15664522|gb|BI701893.1|BI701893
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|33388055|gb|CA851262.1|CA851262
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: gi|6073007|gb|AW102394.1|AW102394
EST:     AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT                         AGGTATTGAGGCTAAGCATCCCAACTTCTGCCCATTCGAAAATGTGCCAGG
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACT-CTGCC-ATTCGAAAATGTGCCAGG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGTGGGCTGACAAGTCATACAAAAAGTCTCATCTTGGAAATGAATGGAAGAAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaatataactcgtactgtgttgcatttacttgcatactttctcaattagatcatctggtgttaagaaattattatgttattctatctgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG