1 5' 3' | 2 5' 3' | 3 5' 3' |
gtaagattaatataactcgtactgtgttgcatttacttgcatactttctcaattagatcatctggtgttaagaaattattatgttattctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTTCAACTCATCAAAAATGGGAAGAAGATTGCTGCATTCGTGCCAAATGAT
species | Glycine max |
transcript | GLYMA19G36250.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|7285057|gb|AW597544.1|AW597544
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|192331181|gb|FK020948.1|FK020948
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|12691424|gb|BG157760.1|BG157760
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|31465409|gb|CD407437.1|CD407437
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCNAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|151410705|gb|EV280520.1|EV280520
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|213598822|gb|DB968293.1|DB968293
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|12689923|gb|BG156259.1|BG156259
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|192301152|gb|FG988017.1|FG988017
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|298181192|gb|HO022631.1|HO022631
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|7590861|gb|AW706604.1|AW706604
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGGTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|151411715|gb|EV281526.1|EV281526
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|15204233|gb|BI427001.1|BI427001
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|298170932|gb|HO015908.1|HO015908
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|213604592|gb|DB966679.1|DB966679
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|192331029|gb|FK020249.1|FK020249
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|9564040|gb|BE473549.1|BE473549
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|12690049|gb|BG156385.1|BG156385
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|31463644|gb|CD405672.1|CD405672
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|38193923|gb|CF923129.1|CF923129
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|213614686|gb|DB970747.1|DB970747
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGEST: gi|9203751|gb|BE329975.1|BE329975
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTG
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|38192612|gb|CF921818.1|CF921818
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|15664500|gb|BI701871.1|BI701871
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|16280693|gb|BI944097.1|BI944097
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|13479574|gb|BG508917.1|BG508917
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|192331180|gb|FK020947.1|FK020947
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|7686003|gb|AW756651.1|AW756651
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|15661759|gb|BI699130.1|BI699130
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|31463628|gb|CD405656.1|CD405656
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAACCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|7692145|gb|AW760259.1|AW760259
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|8827366|gb|BE211096.1|BE211096
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|22930605|gb|BU547752.1|BU547752
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|38191834|gb|CF921040.1|CF921040
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGCGCCAGGGTEST: gi|15285174|gb|BI469065.1|BI469065
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|41146089|gb|CK606300.1|CK606300
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|20498352|gb|BQ273282.1|BQ273282
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|16342347|gb|BI967942.1|BI967942
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|214005463|gb|DB985529.1|DB985529
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AGCTCTCATG-TGGTTAAACCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|192296979|gb|FG991960.1|FG991960
genomic: AGC-CTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|22931295|gb|BU548434.1|BU548434
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|120532758|gb|EH260891.1|EH260891
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|38191888|gb|CF921094.1|CF921094
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGCGCCAGGGTEST: gi|6718905|gb|AW306552.1|AW306552
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|4283798|gb|AI440701.1|AI440701
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: GCTGGTTCATACCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|12773406|gb|BG238333.1|BG238333
genomic: GCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|21678468|gb|BQ630819.1|BQ630819
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGTTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|15661617|gb|BI698988.1|BI698988
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|38193340|gb|CF922546.1|CF922546
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|298172611|gb|HO019651.1|HO019651
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|17023602|gb|BM094636.1|BM094636
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|15664522|gb|BI701893.1|BI701893
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|33388055|gb|CA851262.1|CA851262
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTEST: gi|6073007|gb|AW102394.1|AW102394
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGT
EST: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGAT AGGTATTGAGGCTAAGCATCCCAACTTCTGCCCATTCGAAAATGTGCCAGG
genomic: AAGCCTTTTGCTGGTTCATCCCATGCAAAGGGTATTGTTCTTGAAAAGATgtaagattaa ... ctatctgcagAGGTATTGAGGCTAAGCAGCCCAACT-CTGCC-ATTCGAAAATGTGCCAGG
ctttctcaattagatcatctggtgttaagaaattattatgttattctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTTCAACTCATCAAAAATGGGAAGAAGATTGCTGCATTCGTGCCAAATGAT
ttctatct CT-rich tract
tgttaagaaattatta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagattaatataactcgtactgtgttgcatttacttgcatactttctcaattagatcatctggtgttaagaaattattatgttattctatctgcagAGGTATTGAGGCTAAGCAGCCCAACTCTGCCATTCGAAAATGTGCCAGGGTTCAACTCATCAAAAATGGGAAGAAGATTGCTGCATTCGTGCCAAATGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC