Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCGACATGGACGGAGTCTTTCACGTTCACCGGTCCGGTCACATTCTCCTCGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgattttaatggtgtccctaatcttagtggttccgataaaatgacactgcattttcaattggctgttgtttcagttgtcagaatttataatatctttgcttgtaagctgagttttggttacctttgttcttgccag

Basic information

species Glycine max
transcript GLYMA19G35990.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193619083|gb|FK568391.1|FK568391
EST:     CCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193469264|gb|FK435484.1|FK435484
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193723208|gb|FK658344.1|FK658344
EST:     GCCGGGATCGAAGTCTTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAG-C-TACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208212280|gb|GE015707.1|GE015707
EST:     GCCGGGATCGAAGCTTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGC-TACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208200581|gb|GD997716.1|GD997716
EST:     GTCGTGGCAGAAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAG
genomic: GTCGTGGCAGAA-GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAG
EST: gi|208086398|gb|GD884682.1|GD884682
EST:     GCCGGGATCGAAGTTCTTACTAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAG--C-TAC-AGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|151406157|gb|EV275972.1|EV275972
EST:     CGTCGTAGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193458524|gb|FK422045.1|FK422045
EST:     GCCGGGATCGAAGCTACAGCCGAGGCCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208133591|gb|GD929508.1|GD929508
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208261335|gb|GE058243.1|GE058243
EST:     ACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|207718016|gb|GD698370.1|GD698370
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193300662|gb|FK267661.1|FK267661
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208207994|gb|GE002987.1|GE002987
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208165366|gb|GD960680.1|GD960680
EST:     GCCGGGATCGAAGTCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAG-CTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208108191|gb|GD902507.1|GD902507
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|207716626|gb|GD698100.1|GD698100
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208218556|gb|GE020522.1|GE020522
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|207807947|gb|GD780060.1|GD780060
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTCTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193435440|gb|FK401606.1|FK401606
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193637223|gb|FK582706.1|FK582706
EST:     CGTCGTGGCAGAAGCCGGGATCAAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208270510|gb|GE065752.1|GE065752
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCTAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208056095|gb|GD852402.1|GD852402
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGGTAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208126357|gb|GD924747.1|GD924747
EST:     CCGGGATCGAAGCTACAAGCCGACGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CCGGGATCGAAGCTAC-AGCCGA-GACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208093331|gb|GD895226.1|GD895226
EST:     CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAG
EST: gi|193308840|gb|FK277804.1|FK277804
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193424460|gb|FK388895.1|FK388895
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCTACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193408078|gb|FK374882.1|FK374882
EST:     GCCGGGATCGAAGCTACAGCCGAGTACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGGAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAG-ACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208325741|gb|GE119283.1|GE119283
EST:     CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193437401|gb|FK401350.1|FK401350
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193558029|gb|FK512412.1|FK512412
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193317398|gb|FK282820.1|FK282820
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193468158|gb|FK431801.1|FK431801
EST:     CCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|207837720|gb|GD813288.1|GD813288
EST:     GCCGGGATCGAAGTCTACTAGTCCGTAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAG-CTAC-AG-CCG-AGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208299093|gb|GE097976.1|GE097976
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208130357|gb|GD928130.1|GD928130
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193465966|gb|FK429735.1|FK429735
EST:     CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208044028|gb|GD842398.1|GD842398
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAG
EST: gi|193686482|gb|FK626435.1|FK626435
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|207776463|gb|GD747376.1|GD747376
EST:     GCCGGGATCGAAGTCTTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAG-C-TACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|207711483|gb|GD693637.1|GD693637
EST:     CCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208222787|gb|GE021232.1|GE021232
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGGTAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193696429|gb|FK639755.1|FK639755
EST:     CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208283001|gb|GE077305.1|GE077305
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193307155|gb|FK268839.1|FK268839
EST:     CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193620719|gb|FK568471.1|FK568471
EST:     TACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: TACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193630549|gb|FK584102.1|FK584102
EST:     CGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193658988|gb|FK602113.1|FK602113
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAGCGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193721819|gb|FK658303.1|FK658303
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193712154|gb|FK652649.1|FK652649
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208295127|gb|GE091264.1|GE091264
EST:     ATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: ATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208204246|gb|GE003565.1|GE003565
EST:     CCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208177410|gb|GD973947.1|GD973947
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|207774681|gb|GD748465.1|GD748465
EST:     GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193370865|gb|FK334543.1|FK334543
EST:     GCCGGGATCGAAGTCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAG-CTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193540601|gb|FK496491.1|FK496491
EST:     GCCGGGATCGAAGTCTTACTAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: GCCGGGATCGAAG-C-TAC-AGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|208074813|gb|GD869570.1|GD869570
EST:     CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
EST: gi|193303933|gb|FK270746.1|FK270746
EST:     CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAG                         CCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG
genomic: CGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgatttt ... ttcttgccagCCGATCGAGATCTCCAGTCAGAAGAGAACGAAGCCCAGTTTCTGAAGATAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCGACATGGACGGAGTCTTTCACGTTCACCGGTCCGGTCACATTCTCCTCGTCGTGGCAGAAGCCGGGATCGAAGCTACAGCCGAGACCGCAACTACAGgtttgattttaatggtgtccctaatcttagtggttccgataaaatgacactgcattttcaattggctgttgtttcagttgtcagaatttataatatctttgcttgtaagctgagttttggttacctttgttcttgccag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC