1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTATGGCTATGTTACTCCTAACGATGTTTCTGATTTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAGgttggtatttttgtggtcatgaattttgtatcttttaatcaaatgttaatttgaaagatatattgtttcttttgacaaaaagaaacatttataatttgat...
species | Glycine max |
transcript | GLYMA19G10120.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TTATTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAG GGGCCAAATGGGAACATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAAEST: gi|192332184|gb|FK023833.1|FK023833
genomic: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAGgttggtattt ... attgttacagGGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAA
EST: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAG GGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAAEST: gi|58021090|gb|CX707832.1|CX707832
genomic: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAGgttggtattt ... attgttacagGGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAA
EST: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAG GGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAAEST: gi|51343987|gb|CO984720.1|CO984720
genomic: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAGgttggtattt ... attgttacagGGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAA
EST: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAG GGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAAEST: gi|58017812|gb|CX704554.1|CX704554
genomic: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAGgttggtattt ... attgttacagGGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAA
EST: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAG GGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAA
genomic: TTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAGgttggtattt ... attgttacagGGGCCAAATGGGGCCATCTGTTGCAGAAGATAAGGGAGCAGATGACCAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTATGGCTATGTTACTCCTAACGATGTTTCTGATTTGTTGGACCAACATATTGCAAAGGGAGAGGTCATCAAACGACTTTTGAGgttggtatttttgtggtcatgaattttgtatcttttaatcaaatgttaatttgaaagatatattgtttcttttgacaaaaagaaacatttataatttgat
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaagaaa