1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTGACTCCTCATCTGTTGACGTCGCCATCTTCTGTCTTTCATTGATGGGAACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGGgtttgttttctttcgtatggattttagctgttcaggctggacattgcttccctactcaggatttgacttagtatagtttttgaacag
species | Glycine max |
transcript | GLYMA19G08930.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGG TGGCTGGCTTTTGATAGCAGAAGTAAAGAGCAGGTTTGATCCAAATACTGGEST: gi|26057623|gb|CA800537.1|CA800537
genomic: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGGgtttgttttc ... ttttgaacagTGGCTGGCTTTTGATAGCAGAAGTAAAGAGCAGGTTTGATCCAAATACTGG
EST: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAAG TGGCTGGGCTTT-GATAGCAGAAGTAAAGAGCAGGTTTEST: gi|151406301|gb|EV276116.1|EV276116
genomic: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGGgtttgttttc ... ttttgaacagTGGCTGG-CTTTTGATAGCAGAAGTAAAGAGCAGGTTT
EST: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGG TGGCTGGCTTTTGATAGCEST: gi|192327181|gb|FK015573.1|FK015573
genomic: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGGgtttgttttc ... ttttgaacagTGGCTGGCTTTTGATAGC
EST: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGG TGGCTGGCTTTTGATAGCAEST: gi|254349200|gb|GR859945.1|GR859945
genomic: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGGgtttgttttc ... ttttgaacagTGGCTGGCTTTTGATAGCA
EST: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGG TGGCTGGCTTTTGATAGCAGAAGTAAAGAGCAGGTTTGATCCCAATACTGGEST: gi|51343885|gb|CO984618.1|CO984618
genomic: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGGgtttgttttc ... ttttgaacagTGGCTGGCTTTTGATAGCAGAAGTAAAGAGCAGGTTTGATCCAAATACTGG
EST: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGG TGGCTGGCTTTTGATAGCAGAAGTAAAGAGCAGGTTTGATCCAAATACTGG
genomic: ACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGGgtttgttttc ... ttttgaacagTGGCTGGCTTTTGATAGCAGAAGTAAAGAGCAGGTTTGATCCAAATACTGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGACTCCTCATCTGTTGACGTCGCCATCTTCTGTCTTTCATTGATGGGAACCAACTACCAAAGTTACCTCGAAGAATCGTACAGACTGCTCAAGCCAGGgtttgttttctttcgtatggattttagctgttcaggctggacattgcttccctactcaggatttgacttagtatagtttttgaacag
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