1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTAGCAGCTAGGGTCACACCACGAAATGCCGATAAGGATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGAgtaagtatacattttgtaattaaatagtcatgtattgagttcaagcaatcaatagaatgtgttctttcatatgtatagtattaatttgggggtaattact...
species | Glycine max |
transcript | GLYMA19G08050.2 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGA ATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCAEST: gi|193408580|gb|FK370344.1|FK370344
genomic: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGAgtaagtatac ... gatttgacagATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCA
EST: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGA ATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCAEST: gi|151403633|gb|EV273443.1|EV273443
genomic: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGAgtaagtatac ... gatttgacagATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCA
EST: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGA ATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCAEST: gi|193341998|gb|FK308960.1|FK308960
genomic: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGAgtaagtatac ... gatttgacagATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCA
EST: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGA ATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCAEST: gi|193400938|gb|FK365387.1|FK365387
genomic: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGAgtaagtatac ... gatttgacagATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCA
EST: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGA ATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCAEST: gi|193350382|gb|FK316224.1|FK316224
genomic: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGAgtaagtatac ... gatttgacagATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCA
EST: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGA ATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCA
genomic: GATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGAgtaagtatac ... gatttgacagATTTGAAGTACTAGATGAGGAACCAGGTGATGATGAAGAAAGCAGTGGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAGCAGCTAGGGTCACACCACGAAATGCCGATAAGGATGAATGGTTTGTCGTAAAAGTGATTCATTTTGATAAGGAATCAAAGGAgtaagtatacattttgtaattaaatagtcatgtattgagttcaagcaatcaatagaatgtgttctttcatatgtatagtattaatttgggggtaattact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttggggg