1 5' 3' | 2 5' 3' | 3 5' 3' |
TACCCCATCTTTCATCTGTTTACATTGCTGTTATAATTGACTGCATCAGAATCAGTTATCAGGtttatcttttttacattagatcgtaataccatatcattgccatcactagatttcttgaaaatacttgccctcctctcactttttgtgtggctacaga
species | Glycine max |
transcript | GLYMA18G47570.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCTGTTTACATTGCTGTTATAATTGACTGCATCAGAATCAGTTATCAGA TGCATATCAGAAGGGGGGAATTGCAGGAGCTGTTGGAGAAGGCAATGTTGTEST: gi|192313525|gb|FK004135.1|FK004135
genomic: TCTGTTTACATTGCTGTTATAATTGACTGCATCAGAATCAGTTATCAGGtttatctttt ... tggctacagaTGCATATCAGAA-GGGGGAATTGCAGGAGCTGTTGGAGAAGGCAATGTTGT
EST: ATCTGTTTACATTGCTGTTATAATTGACTGCATCAGAATCAGTTATCAGA TGCATATCAGAAGGGGGAATTGCAGGAGCTGTTGGAGAAGGCAATGTTGTCEST: gi|207768741|gb|GD740552.1|GD740552
genomic: ATCTGTTTACATTGCTGTTATAATTGACTGCATCAGAATCAGTTATCAGGtttatctttt ... tggctacagaTGCATATCAGAAGGGGGAATTGCAGGAGCTGTTGGAGAAGGCAATGTTGTC
EST: ATCTGTTTACATTGCTGTTATAATTGACTGCATCAGAATCAGTTATCAGA TGCATATCAGAAGGGGGAATTGCAGGAGCTGTTGGAGAAGGCAATGTTGTC
genomic: ATCTGTTTACATTGCTGTTATAATTGACTGCATCAGAATCAGTTATCAGGtttatctttt ... tggctacagaTGCATATCAGAAGGGGGAATTGCAGGAGCTGTTGGAGAAGGCAATGTTGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TACCCCATCTTTCATCTGTTTACATTGCTGTTATAATTGACTGCATCAGAATCAGTTATCAGGtttatcttttttacattagatcgtaataccatatcattgccatcactagatttcttgaaaatacttgccctcctctcactttttgtgtggctacaga
- - - - - - - - - - - - - GCTGTT