1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CTATGTTCAGTACAATATCTATGGAAACCTCTTTGAGGTCTCTAGGAAGTATGTTCCTCCTATTCGCCCTGTGGGAAGAGGAGCATATGGTATTGTTTGGtaaggaagaaacttttttgtggggttgagcttttgttttggctgaattcatttgttttctgtgttgtttttgttgtttgtgagggtgttttgaggataaa...
species | Glycine max |
transcript | GLYMA18G47140.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATGTTCCTCCTATTCGCCCTGTGGGAAGAGGAGCATATGGTATTGTTTGT GCTGCTGTAAATGCAGAGACACGTGAAGAAGTTGCCATTAAGAAGGTTGGCEST: gi|151406082|gb|EV275897.1|EV275897
genomic: ATGTTCCTCCTATTCGCCCTGTGGGAAGAGGAGCATATGGTATTGTTTGGtaaggaagaa ... ttctttcagtGCTGCTGTAAATGCAGAGACACGTGAAGAAGTTGCCATTAAGAAGGTTGGC
EST: ATGTTCCTCCTATTCGCCCTGTGGGAAGAGGAGCATATGGTATTGTTTGT GCTGCTGTAAATGCAGAGACACGTGAAGAAGTTGCCATTAAGAAGGTTGGC
genomic: ATGTTCCTCCTATTCGCCCTGTGGGAAGAGGAGCATATGGTATTGTTTGGtaaggaagaa ... ttctttcagtGCTGCTGTAAATGCAGAGACACGTGAAGAAGTTGCCATTAAGAAGGTTGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTATGTTCAGTACAATATCTATGGAAACCTCTTTGAGGTCTCTAGGAAGTATGTTCCTCCTATTCGCCCTGTGGGAAGAGGAGCATATGGTATTGTTTGGtaaggaagaaacttttttgtggggttgagcttttgttttggctgaattcatttgttttctgtgttgtttttgttgtttgtgagggtgttttgaggataaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggggttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtgaggg