1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CGCCCATACCTGATTGAATTAATGTTCTCAGACAACATTCAAATCTCAAATCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCAggtaatcccacttcacttgtattcaagtcttataaaaaaatgtcattagatatactgatatagctactttactctcttattgtctttgaatattataataacaaatgatttgatactatgca
species | Glycine max |
transcript | GLYMA18G47130.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCA GCAATATTATTGTGCAAGGCATCACCATTTATGCTCCTGTCACATCTCTAAEST: gi|7639619|gb|AW733938.1|AW733938
genomic: TCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCAggtaatccca ... atactatgcaGCAATATTATTGTGCAAGGCATCACCATTTATGCTCCTGTCACATCTCCAA
EST: TCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCA GCAATATTATTGTGCAAGGCATCACCATTTATGCTCCTGTCACATCTCCAAEST: gi|9902791|gb|BE611759.1|BE611759
genomic: TCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCAggtaatccca ... atactatgcaGCAATATTATTGTGCAAGGCATCACCATTTATGCTCCTGTCACATCTCCAA
EST: TCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCA GCAATATTATTGTGCAAGGCATCACCATTTATGCTCCTGTCACATCTCCAAEST: gi|208312509|gb|GE113805.1|GE113805
genomic: TCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCAggtaatccca ... atactatgcaGCAATATTATTGTGCAAGGCATCACCATTTATGCTCCTGTCACATCTCCAA
EST: TCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCA GCAATATTATTGTGCAAGGCATCACCATTTATGCTCCTGTCACATCTCCAA
genomic: TCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCAggtaatccca ... atactatgcaGCAATATTATTGTGCAAGGCATCACCATTTATGCTCCTGTCACATCTCCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCCCATACCTGATTGAATTAATGTTCTCAGACAACATTCAAATCTCAAATCTAACTCTACTCAATTCCCCATCATGGAATGTTCATCCAGTTTACAGCAggtaatcccacttcacttgtattcaagtcttataaaaaaatgtcattagatatactgatatagctactttactctcttattgtctttgaatattataataacaaatgatttgatactatgca
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