Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAAAGATTGACAAAGACAGTTTCACCATCAGTTTCTTCCAAAAAATTTGGCTCCCTCTCTGCATTGGATGCCAGGCCAGGCTCCATTTCGAAAATTATGgtacacatattttctttgtattttgaatattttattattgtgttgggggctgtctttgttctatttcattctgattaaatatcttctgataacttttgctag

Basic information

species Glycine max
transcript GLYMA18G46930.1
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192327071|gb|FK015463.1|FK015463
EST:     GCTCCCTCTCTGCATTGGATGCCAGGCCAGGCTCCATTTCGAAAATTATG                         GGAGATGAGTTAGAGGAAGGGGAAATTGTAGTATCTGGTGATTCTCACATG
genomic: GCTCCCTCTCTGCATTGGATGCCAGGCCAGGCTCCATTTCGAAAATTATGgtacacatat ... cttttgctagGGAGATGAGTTAGAGGAAGGGGAAATTGTAGTATCTGGTGATTCTCACATG
EST: gi|298195640|gb|HO044031.1|HO044031
EST:     GCTCCCTCTCTGCATTGGACGCCAGGCCAGGCTCCATTTCGAAAATTATG                         GGAGATGAGTTAGAGGAAGGGGAAATTGTAGTATCTGGTGATTCTCACATG
genomic: GCTCCCTCTCTGCATTGGATGCCAGGCCAGGCTCCATTTCGAAAATTATGgtacacatat ... cttttgctagGGAGATGAGTTAGAGGAAGGGGAAATTGTAGTATCTGGTGATTCTCACATG