1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
TGGAATTTCCTGGTGAAGTTATTGGGCTCTCATTCCCTCCATCAGAAACTTCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAGgtatgcctttttattttctttttaaatatgaatttgacatcttgcgttgatgaaatgataaagaattaaatgagaagtatatgtcttatgcaaaaatact...
species | Glycine max |
transcript | GLYMA17G35220.1 |
intron # | 13 |
splice site | 5' |
intron type | U2 |
EST: TCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAG GGCTATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGACGAAEST: gi|9439805|gb|BE440319.1|BE440319
genomic: TCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAGgtatgccttt ... ccatcttcagGGCTATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGACGAA
EST: TCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAG GGCTATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGACGAAAGTGAEST: gi|5760461|gb|AI965824.1|AI965824
genomic: TCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAGgtatgccttt ... ccatcttcagGGCTATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGACGAAAGTGA
EST: TCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAG GGCTATGTGCTTGATEST: gi|16105907|gb|BI893638.1|BI893638
genomic: TCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAGgtatgccttt ... ccatcttcagGGCTATGTGCTTGAT
EST: TCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAG GGCTATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGACGAAAGTGA
genomic: TCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAGgtatgccttt ... ccatcttcagGGCTATGTGCTTGATTGACTTTGGGTTGCCTGTGGAGCAAGACGAAAGTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGAATTTCCTGGTGAAGTTATTGGGCTCTCATTCCCTCCATCAGAAACTTCATCTTCTCCATCGGCAACTTCATCTTCAGTTGTTGTTTACAGCTCCAGgtatgcctttttattttctttttaaatatgaatttgacatcttgcgttgatgaaatgataaagaattaaatgagaagtatatgtcttatgcaaaaatact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gataaaga