1 5' 3' | 2 5' 3' | 3 5' 3' |
CGGGAGATGCGGAGAACTGAGCCAGAAAGAAACCTGCGTCGTCTTAAACGACACCGTTCCTCTCCCCGTTGGCAAGAGCACCACTCATCTCATTCAAAAGgttacctaaaatgccctttgcgtttctttgttcaattctaattcgatcgattcaatagtctctgtaatttgtatttcttagtaatcaatagcgttaggag...
species | Glycine max |
transcript | GLYMA17G34940.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: ACACCGTTCCTCTCCCCGTTGGCAAGAGCACCACTCATCTCATTCAAAAG TGCAAATTTTGTGGCAGGGATGGCACTGTGACCATGATTGAAGGCAAAGGTEST: gi|58014583|gb|CX701325.1|CX701325
genomic: ACACCGTTCCTCTCCCCGTTGGCAAGAGCACCACTCATCTCATTCAAAAGgttacctaaa ... tggtatgcagTGCAAATTTTGTGGCAGGGATGGCACTGTGACCATGATTGAAGGCAAAGGT
EST: ACACCGTTCTTCTCCCCGTTGGCAAGAGCACCATTCATTTCATTCAAAAG TGCAAATTTTGTGGCAGGGATGGCACTGTGACCATGATTGAAGGCAAAGGTEST: gi|192326020|gb|FK016202.1|FK016202
genomic: ACACCGTTCCTCTCCCCGTTGGCAAGAGCACCACTCATCTCATTCAAAAGgttacctaaa ... tggtatgcagTGCAAATTTTGTGGCAGGGATGGCACTGTGACCATGATTGAAGGCAAAGGT
EST: ACACCGTTCCTCTCCCCGTTGGCAAGAGCACCACTCATCTCATTCAAAAG TGCAAATTTTGTGGCAGGGATGGCACTGTGACCATGATTGAAGGCAAAGGT
genomic: ACACCGTTCCTCTCCCCGTTGGCAAGAGCACCACTCATCTCATTCAAAAGgttacctaaa ... tggtatgcagTGCAAATTTTGTGGCAGGGATGGCACTGTGACCATGATTGAAGGCAAAGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGGAGATGCGGAGAACTGAGCCAGAAAGAAACCTGCGTCGTCTTAAACGACACCGTTCCTCTCCCCGTTGGCAAGAGCACCACTCATCTCATTCAAAAGgttacctaaaatgccctttgcgtttctttgttcaattctaattcgatcgattcaatagtctctgtaatttgtatttcttagtaatcaatagcgttaggag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA